Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03968 and BL02025
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:59
# Commandline: needle
# -asequence dna-align/BSNT_03968___udk.1.5803.seq
# -bsequence dna-align/BL02025___udk.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03968___udk-BL02025___udk.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03968___udk-BL02025___udk.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03968___udk
# 2: BL02025___udk
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 640
# Identity: 510/640 (79.7%)
# Similarity: 510/640 (79.7%)
# Gaps: 8/640 ( 1.2%)
# Score: 2029.5
#
#
#=======================================
BSNT_03968___ 1 ATGGGTAAGAATCCAGTAGTCATTGGAATCGCAGGAGGTTCCGGTTCAGG 50
|||||.||.||.||.|||||.||.||.||.||.|||||.|||||.|||||
BL02025___udk 1 ATGGGGAAAAAACCGGTAGTTATCGGCATAGCGGGAGGCTCCGGATCAGG 50
BSNT_03968___ 51 AAAAACGAGTGTCACACGGTCCATTTATGAACAGTTTAAAGGACACTCAA 100
|||||||||.|||||..|.|||||||||||||||||||||||.||.||.|
BL02025___udk 51 AAAAACGAGCGTCACCAGATCCATTTATGAACAGTTTAAAGGTCATTCGA 100
BSNT_03968___ 101 TTTTAATGATCCAGCAGGACCTTTATTATAAAGACCAAAGCCATCTTCCG 150
|.||||||.||.|.|||||..|.|||||||||||.||.||||||||.|||
BL02025___udk 101 TCTTAATGCTCGAACAGGATTTATATTATAAAGATCAGAGCCATCTGCCG 150
BSNT_03968___ 151 TTTGAAGAAAGGCTGAACACAAACTACGATCATCCGCTTGCGTTTGATAA 200
||||||||..|||||||.||.||||||||.|||||||||||.|||||.||
BL02025___udk 151 TTTGAAGAGCGGCTGAATACGAACTACGACCATCCGCTTGCATTTGACAA 200
BSNT_03968___ 201 TGACTATTTAATCGAGCATATTCAGGATCTATTGAAT----TACCGCCCG 246
|||||||||.|||||||||.|..|.|| |||| .| |||.|.|||
BL02025___udk 201 TGACTATTTGATCGAGCATTTAAACGA---ATTG-CTCGCGTACAGGCCG 246
BSNT_03968___ 247 ATTGAAAAGCCGATTTATGACTATAAGCTTCACACACGTTCAGAAGAAAC 296
||..|||||||||||||.||.||.|||||.||.||.||||||||.|||..
BL02025___udk 247 ATCAAAAAGCCGATTTACGATTACAAGCTGCATACGCGTTCAGAGGAAGT 296
BSNT_03968___ 297 GGTTCACGTAGAGCCAAAGGATGTTATTATCCTTGAAGGCATTCTTGTTC 346
.||.|||||.||.||.||.|||||||||||..|.|||||.||.|||||||
BL02025___udk 297 CGTGCACGTCGATCCGAAAGATGTTATTATTTTGGAAGGAATCCTTGTTC 346
BSNT_03968___ 347 TTGAAGACAAAAGGCTTCGTGATCTGATGGATATCAAGCTTTATGTTGAT 396
|.||.||..|||||||.||.||..|.|||||.||||||||.|||||.|||
BL02025___udk 347 TCGAGGATGAAAGGCTCCGCGACTTAATGGACATCAAGCTGTATGTCGAT 396
BSNT_03968___ 397 ACGGACGCTGACTTGCGTATCATCAGACGGATTATGAGAGATATTAATGA 446
||||||||.|||.||||.|||||||||.||||..|.|||||.||.||.||
BL02025___udk 397 ACGGACGCCGACCTGCGGATCATCAGAAGGATGCTCAGAGACATAAAAGA 446
BSNT_03968___ 447 GCGCGGACGCTCTATTGATTCTGTCATTGAACAATATGTGTCAGTGGTCC 496
..|.|||||.||.||.|||||||||||.||.||.||..|.|||||.|||.
BL02025___udk 447 AAGAGGACGTTCGATCGATTCTGTCATCGAGCAGTACATCTCAGTCGTCA 496
BSNT_03968___ 497 GTCCGATGCATAACCAATTCGTCGAGCCGACGAAACGATACGCTGATATT 546
|.||||||||||||||.||.|||||.|||||||||||.||.||.|||||.
BL02025___udk 497 GACCGATGCATAACCAGTTTGTCGAACCGACGAAACGCTATGCCGATATC 546
BSNT_03968___ 547 ATTATCCCGGAAGGCGGTCAGAATCACGTCGCAATTGATCTGATGGTCAC 596
|||||.|||||.|||||.||.||.|.||||||.||.||.||||||||.||
BL02025___udk 547 ATTATTCCGGAGGGCGGCCAAAACCGCGTCGCCATCGACCTGATGGTAAC 596
BSNT_03968___ 597 AAAAATTCAAACCATTCTTGAACAAAACGCGATTTTGTAA 636
||||||.|||||.|||||||||||||||||||||||.|||
BL02025___udk 597 AAAAATACAAACTATTCTTGAACAAAACGCGATTTTATAA 636
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