Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03966 and BL02024

See DNA alignment / Visit BSNT_03966 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:59
# Commandline: needle
#    -asequence pep-align/BSNT_03966___greA.1.5803.seq
#    -bsequence pep-align/BL02024___greA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03966___greA-BL02024___greA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03966___greA-BL02024___greA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03966___greA
# 2: BL02024___greA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 158
# Identity:     141/158 (89.2%)
# Similarity:   151/158 (95.6%)
# Gaps:           1/158 ( 0.6%)
# Score: 704.0
# 
#
#=======================================

BSNT_03966___      1 MAQEKVFPMTAEGKQKLEQELEYLKTVKRKEVVERIKIARSFGDLSENSE     50
                     ||||||||||..||:|||:||||||||||||||||||:||||||||||||
BL02024___gre      1 MAQEKVFPMTETGKKKLEEELEYLKTVKRKEVVERIKVARSFGDLSENSE     50

BSNT_03966___     51 YDSAKEEQAFVEGRVTTLENMIRNAKIIEDDG-GSNVVGLGKTVTFVELP     99
                     ||||||||||||||:|||:||||||||||||| .|::|.|||||||.|||
BL02024___gre     51 YDSAKEEQAFVEGRITTLDNMIRNAKIIEDDGANSDIVSLGKTVTFTELP    100

BSNT_03966___    100 DGDEESYTIVGSAEADPFEGKISNDSPIAKSLLGKKVDEEVTVQTPGGEM    149
                     ||:||||||||||||||||||||||||||||||||:|.:|||||||||||
BL02024___gre    101 DGEEESYTIVGSAEADPFEGKISNDSPIAKSLLGKQVGDEVTVQTPGGEM    150

BSNT_03966___    150 LVKIVKIS    157
                     ||||||||
BL02024___gre    151 LVKIVKIS    158


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