Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03966 and BL02024
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:59
# Commandline: needle
# -asequence dna-align/BSNT_03966___greA.1.5803.seq
# -bsequence dna-align/BL02024___greA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03966___greA-BL02024___greA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03966___greA-BL02024___greA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03966___greA
# 2: BL02024___greA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 482
# Identity: 391/482 (81.1%)
# Similarity: 391/482 (81.1%)
# Gaps: 13/482 ( 2.7%)
# Score: 1589.0
#
#
#=======================================
BSNT_03966___ 1 ATGGCACAAGAGAAAGTTTTTCCTATGACTGCAGAA---GGAAAACAAAA 47
|||||||||||||||||.|||||||||| ||||| |||||..||||
BL02024___gre 1 ATGGCACAAGAGAAAGTATTTCCTATGA---CAGAAACGGGAAAGAAAAA 47
BSNT_03966___ 48 ACTTGAACAAGAATTAGAATATTTGAAAACGGTTAAACGAAAAGAAGTAG 97
|||.|||.|||||.|.||.||||||||||||||||||||.||||||||.|
BL02024___gre 48 ACTGGAAGAAGAACTTGAGTATTTGAAAACGGTTAAACGTAAAGAAGTTG 97
BSNT_03966___ 98 TAGAGCGAATCAAAATTGCGAGAAGCTTCGGAGACCTTTCCGAGAACTCT 147
|.||.||.||.|||.|.||.|||||||||||||||||||||||.|||||.
BL02024___gre 98 TTGAACGTATTAAAGTGGCAAGAAGCTTCGGAGACCTTTCCGAAAACTCC 147
BSNT_03966___ 148 GAATACGATTCAGCGAAAGAAGAGCAGGCATTTGTAGAGGGCCGCGTGAC 197
||||||||||||||.||||||||.||.||.||||||||.||.|||.|.||
BL02024___gre 148 GAATACGATTCAGCAAAAGAAGAACAAGCTTTTGTAGAAGGGCGCATCAC 197
BSNT_03966___ 198 GACTCTTGAAAATATGATTCGCAATGCGAAAATCATTGAAGATGACGGCG 247
.||.|||||.||||||||.|||||.||.||.|||||.|||||||||||.|
BL02024___gre 198 AACCCTTGACAATATGATCCGCAACGCAAAGATCATCGAAGATGACGGTG 247
BSNT_03966___ 248 ---GCTCTAACGTTGTCGGTTTGGGTAAAACCGT--CACTTTCGTCGAAC 292
.|||..||.|.|||.|..|.||.|||||||| ||.||.|| ||.|
BL02024___gre 248 CAAACTCAGACATCGTCAGCCTTGGAAAAACCGTTACATTTACG--GAGC 295
BSNT_03966___ 293 TGCCTGACGGTGATGAAGAATCATATACGATCGTCGGAAGCGCGGAAGCT 342
|.|||||||||||.||||||||.||||||||.||.||.|||||||||||.
BL02024___gre 296 TTCCTGACGGTGAAGAAGAATCTTATACGATTGTGGGCAGCGCGGAAGCC 345
BSNT_03966___ 343 GACCCGTTTGAAGGGAAAATCTCAAACGATTCACCGATCGCAAAAAGCCT 392
||.|||||||||||.||||||||.||||||||.||.|||||.||||||||
BL02024___gre 346 GATCCGTTTGAAGGAAAAATCTCGAACGATTCCCCAATCGCGAAAAGCCT 395
BSNT_03966___ 393 CTTGGGCAAAAAAGTAGATGAAGAAGTCACAGTACAAACACCGGGCGGAG 442
..|.|||||..|.||.|..||.|||||.||.||.||||||||.|||||.|
BL02024___gre 396 TCTCGGCAAGCAGGTTGGAGACGAAGTAACCGTTCAAACACCTGGCGGCG 445
BSNT_03966___ 443 AAATGCTTGTGAAAATTGTGAAAATTTCATAA 474
||||||||||.|||||||||||||||||||||
BL02024___gre 446 AAATGCTTGTAAAAATTGTGAAAATTTCATAA 477
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