Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03964 and BL02023

See DNA alignment / Visit BSNT_03964 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:59
# Commandline: needle
#    -asequence pep-align/BSNT_03964___yrrR.1.5803.seq
#    -bsequence pep-align/BL02023.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03964___yrrR-BL02023.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03964___yrrR-BL02023.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03964___yrrR
# 2: BL02023
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 584
# Identity:     413/584 (70.7%)
# Similarity:   481/584 (82.4%)
# Gaps:           0/584 ( 0.0%)
# Score: 2163.0
# 
#
#=======================================

BSNT_03964___      1 MKISKRMKLAVIAFLIVFFLLLLRLAEIQLFFTESFSKKKINLIQESVKQ     50
                     ||..||||...|........||:|||||||||||||||:.:|||||||||
BL02023            1 MKWQKRMKWVSIIISAALLFLLIRLAEIQLFFTESFSKRNVNLIQESVKQ     50

BSNT_03964___     51 RTEEVLISDGRGSFLDRNGRALTGQSEPAVVLFPFLLTQDWPIKKVADIL    100
                     |||||.|||||||||||||..|:...:||:||||||..|.||.|:.|:||
BL02023           51 RTEEVRISDGRGSFLDRNGEHLSVSQKPAIVLFPFLKNQPWPAKEAAEIL    100

BSNT_03964___    101 GMSEDNLRQTLGQAKKPVILQQKKIKTLSKQSITKINSLKYPGIYGVYME    150
                     .|:||.|...|..|||||||.:....::||.::.|||.|||||:||||:|
BL02023          101 NMTEDELGSKLDHAKKPVILTKHDGASVSKTALEKINKLKYPGVYGVYIE    150

BSNT_03964___    151 NEDKPSLASHTIGSTNQDPALLRKKYPDKGSLPITTEIGTTGLERTFDEF    200
                     ..:|..|||||:|.|||||.|||:|||||..|.|:|:|||.|:|||||||
BL02023          151 ETEKNRLASHTLGMTNQDPDLLRRKYPDKEGLSISTKIGTFGMERTFDEF    200

BSNT_03964___    201 LLPEQDTKLLYHVDGKGNPLFGMDVKYTAEANTFYPLQVKTTIDQSIQKA    250
                     |||||||||||||||.|||||||||||||:||.|||||||||:|:.:|:|
BL02023          201 LLPEQDTKLLYHVDGLGNPLFGMDVKYTADANPFYPLQVKTTLDKKVQQA    250

BSNT_03964___    251 MEEVLDEQGLKKGGAVLLDIENSSVLGIVSKPDADVSRQNTLQNYMLTPI    300
                     ||:|||:..|.||.|||||||.:.|:.|.||||.:::.|.|.|||||||:
BL02023          251 MEDVLDDHQLDKGWAVLLDIETNGVVAIASKPDLNMAAQKTRQNYMLTPV    300

BSNT_03964___    301 YPGSVFKTVIAAAAIENNMVKPSQTFNCNFNLYGEPGDDKGTLSFDESFA    350
                     |||||||||||||||||.:..||:|||||.|||||.|:|||.||.::|||
BL02023          301 YPGSVFKTVIAAAAIENGLDHPSKTFNCNLNLYGEAGEDKGKLSLEDSFA    350

BSNT_03964___    351 QSCNYTFTSLAEQLMKKDSSVIEDMSEKLALTDRAGWEGKLYHETDFRQL    400
                     :|||||||:||.||::|:||||||.:.||.||.|.|||||||||.:|||.
BL02023          351 ESCNYTFTNLAGQLVEKNSSVIEDTAAKLGLTGRVGWEGKLYHEDEFRQF    400

BSNT_03964___    401 YNEKSGVIWGDEKDKSVKKAIAQTAIGQKNVKVTPLEVANMMATIARGGE    450
                     |:|.:|.||||||||.||||:|||||||||||:||||:.|||||||||||
BL02023          401 YHETAGSIWGDEKDKKVKKAVAQTAIGQKNVKLTPLEIVNMMATIARGGE    450

BSNT_03964___    451 KRQVKIAEQIEYKNGTTLVTFKDQKLKGETIDKYTSQQLQKILRRVVESP    500
                     |:|||||:||||||||.:..|||.:|.||.||:||:|:|||:||:||.|.
BL02023          451 KKQVKIADQIEYKNGTLMTAFKDHELPGEKIDQYTAQKLQKLLRKVVTSE    500

BSNT_03964___    501 SGTGRRFQDLPYTVAGKSGTAQTGKLSKEKETLYEKWFAGYFPADKPKYA    550
                     .||||||.||||.|||||||||||:.:.:|:|||.|||||||||||||||
BL02023          501 KGTGRRFSDLPYDVAGKSGTAQTGRTTDDKKTLYHKWFAGYFPADKPKYA    550

BSNT_03964___    551 LVVLHMDTPGDKALTNSVFYDIVKKVHEIEINQK    584
                     |||:|||||..||.||:|||||||||:|||.||.
BL02023          551 LVVVHMDTPDSKAATNAVFYDIVKKVYEIEKNQT    584


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_03964 and BL02023

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
