Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01366 and BL02001

See DNA alignment / Visit BSNT_01366 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:53
# Commandline: needle
#    -asequence pep-align/BSNT_01366___yfiB.1.5803.seq
#    -bsequence pep-align/BL02001___yfiB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01366___yfiB-BL02001___yfiB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01366___yfiB-BL02001___yfiB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01366___yfiB
# 2: BL02001___yfiB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 582
# Identity:     231/582 (39.7%)
# Similarity:   355/582 (61.0%)
# Gaps:          16/582 ( 2.7%)
# Score: 1095.5
# 
#
#=======================================

BSNT_01366___      1 MQKALSFLKPYSLLAGIALILMLTELAVELMQPLLIAKIIDDGILKQDLR     50
                     |...|.:||||.|...:..:..|....:||..|.|:|.::|.||:..|:.
BL02001___yfi      1 MISLLKYLKPYKLQVILVAVFTLLSSVLELYLPTLMADVVDVGIVNSDMP     50

BSNT_01366___     51 HVWIWGAVMIGLTVLSFAAGMLNSFYAAHVSQSFSYDTRKGLFQKIQSFS    100
                     .:...|..||..::|:....:..:|:|:..:..|..|.|:.||.|::..|
BL02001___yfi     51 FILKTGGWMIACSLLAIMMTVGKAFFASKTALGFGRDIRRKLFVKVEHHS    100

BSNT_01366___    101 YSTFGQFSSSSYITRLTNDVTQVQNMIFMSLRFMLRAPLMIAGGIVLSLA    150
                     ...||:.||:|.|||.||||.|||:::.|.|..|.|||||:.|||||:::
BL02001___yfi    101 MDEFGKISSASLITRTTNDVKQVQDVLNMMLSLMTRAPLMLVGGIVLAVS    150

BSNT_01366___    151 VNVKLGFFLLVTIPILILFLLWVLRKGGALFRSVQKRLDQVNTIMQENLI    200
                     .:.||....|..:|||...:..:.||...||..:||:.|::|.:::|.|.
BL02001___yfi    151 RDAKLSIIFLAALPILAGLIFLITRKAVPLFGVLQKKTDRLNLVLREGLT    200

BSNT_01366___    201 AIKLIKALLRGSHEVKRFIKANTRLMEKTVSAFQLVEFTMPVLMLLMNLC    250
                     .:::|:|..|...|..||.|||....:..::..:::.|..||:|::||..
BL02001___yfi    201 GVRVIRAFNRVDQEKVRFQKANEEFRDTGIAVNRIMAFLFPVMMIMMNFT    250

BSNT_01366___    251 ILLILWAGSYSITSGSTQVGDVVAIINYATRITGALSMFPFLIMIFTRAK    300
                     .:.|:|.|...|..||.|||:::|.:.||:.|..||.|.....::..||:
BL02001___yfi    251 NIAIIWFGGIRIDQGSMQVGNLMAFLQYASMILIALIMLAMTFVMIPRAQ    300

BSNT_01366___    301 ASGDRIGEVLETEGD-------EREEGIIFDRLSGQIEFQHVSFRYPEMD    343
                     ||..||.|||.||..       :::.|     |.|.:|||:|:|||...:
BL02001___yfi    301 ASAGRINEVLLTEPSITDPKEPQKDSG-----LRGYVEFQNVTFRYAGAE    345

BSNT_01366___    344 REALRNVSFSAKPRETIAILGATGSGKSTLFQLIPRLYQPDSGRIYIDEK    393
                     :..|.::||.|||.||.||:|:||:||:|:.|||||.:..:.|.:.::..
BL02001___yfi    346 KPVLEDISFKAKPGETTAIIGSTGAGKTTILQLIPRFFDIEKGTVLVNGT    395

BSNT_01366___    394 PVQDIPAEGLRRQIGYVPQEVLLFSGTIKENIAWGKENASLDEIMDAAKH    443
                     .|:.:..:.||.:||||||:..:||||||:||.:|||:|:.:||::|.:.
BL02001___yfi    396 DVRKMAQKELRAKIGYVPQKASIFSGTIKDNIRFGKEDATDEEILEALET    445

BSNT_01366___    444 AQIHETILKLPNGYDTVLGQRGVNLSGGQKQRISIARALIRKPAILLLDD    493
                     ||..|.:....||.::.:.|.|.|||||||||:||||||:|||.|.|.||
BL02001___yfi    446 AQAAEFVEGKENGIESEIEQAGANLSGGQKQRLSIARALVRKPEIYLFDD    495

BSNT_01366___    494 STSALDLQTEAKLLEAI--STYHCTTLIITQKITTAMKADQILLLEDGEL    541
                     |.||||.:|:.||.:|:  :|.....:|:.|:::|...||||::|.:|::
BL02001___yfi    496 SFSALDYKTDQKLRKALKKTTADAAVIIVAQRVSTITDADQIIVLNEGKI    545

BSNT_01366___    542 IEKGTHSELLSASQLYKRIYESQFGREGSESC    573
                     ...|||.:||:.:.:|:.|..||...|.|.  
BL02001___yfi    546 AGIGTHQQLLAENGIYQEIVASQQAEEESA--    575


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_01366 and BL02001

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
