Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03016 and BL01990

See DNA alignment / Visit BSNT_03016 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:43
# Commandline: needle
#    -asequence pep-align/BSNT_03016___yngG.1.5803.seq
#    -bsequence pep-align/BL01990___yngG.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03016___yngG-BL01990___yngG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03016___yngG-BL01990___yngG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03016___yngG
# 2: BL01990___yngG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 303
# Identity:     218/303 (71.9%)
# Similarity:   248/303 (81.8%)
# Gaps:           4/303 ( 1.3%)
# Score: 1137.0
# 
#
#=======================================

BSNT_03016___      1 MSYPKKVKIKEVGPRDGLQNEPVWIATEDKITWINQLSRTGLSYIEITSF     50
                     |..||.:.|||||||||||||...::|.||||||:.||.|||||||||||
BL01990___yng      1 MDVPKNIFIKEVGPRDGLQNEQTALSTADKITWIDMLSATGLSYIEITSF     50

BSNT_03016___     51 VHPKWIPALRDAIDVAKGIDRLKGVTYAALVPNQRGLENALEGGINEACV    100
                     |||||||||.||:||||||:|..|||||||:||::|||.||||||:||.|
BL01990___yng     51 VHPKWIPALSDALDVAKGINRKPGVTYAALIPNRKGLERALEGGIDEASV    100

BSNT_03016___    101 FMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPY    150
                     ||||||||||||||||..|:|.:||:|...|::|.||.||||||||||||
BL01990___yng    101 FMSASETHNRKNINKSIGETLPVLKEVIGAAKQAGLTARAYLSTVFGCPY    150

BSNT_03016___    151 EKDVPIEQVIRLSEALFEFGISELSLGDTIGAANPAQVETVLEALLARFP    200
                     |..||:||:||.||.||:.||:|||||||||||||.||:.|||.||.|||
BL01990___yng    151 EHHVPLEQIIRTSETLFDMGINELSLGDTIGAANPVQVQRVLEVLLKRFP    200

BSNT_03016___    201 ANQIALHFHDTRGTALANMVTALQMGITVFDGSAGGLGGCPYAPGSSGNA    250
                     ...||||||||||.|||||:.|:.|||||||.|.|||||||||||::|||
BL01990___yng    201 KENIALHFHDTRGMALANMIAAMDMGITVFDSSCGGLGGCPYAPGATGNA    250

BSNT_03016___    251 ATEDIVYMLEQMDIKTNVKLEKLLSAAKWIEEKMGKPLPSRNLQVFKSS-    299
                     ||:|::||..||.|:|.|.|.||||||||||:|.|:.|||||||..||. 
BL01990___yng    251 ATDDLIYMCAQMGIETGVDLSKLLSAAKWIEDKTGRELPSRNLQAAKSKN    300

BSNT_03016___    299 ---    299
                        
BL01990___yng    301 CFH    303


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