Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03019 and BL01988
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:43
# Commandline: needle
# -asequence pep-align/BSNT_03019___yngH.1.5803.seq
# -bsequence pep-align/BL01988___yngH.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03019___yngH-BL01988___yngH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03019___yngH-BL01988___yngH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03019___yngH
# 2: BL01988___yngH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 446
# Identity: 312/446 (70.0%)
# Similarity: 368/446 (82.5%)
# Gaps: 2/446 ( 0.4%)
# Score: 1612.0
#
#
#=======================================
BSNT_03019___ 1 MFTKVLIANRGEIAMRIIRTCSRLGIKTVAVYSEADKDALHTKAATEAYL 50
||.|||||||||||:||||||.||||:|.|||||||.::||.|||.||:|
BL01988___yng 1 MFKKVLIANRGEIALRIIRTCQRLGIQTAAVYSEADAESLHVKAADEAWL 50
BSNT_03019___ 51 IGESRVSESYLNIERIIKTAKKANADAIHPGYGLLSENSRFAERCKQENI 100
||:.||||||||||:||:|||||...|||||||||||||||||||.:|||
BL01988___yng 51 IGKPRVSESYLNIEKIIETAKKAGVCAIHPGYGLLSENSRFAERCLKENI 100
BSNT_03019___ 101 VFIGPSPDIIAKMGSKIEARKAMEAAGVPVVPGVSESLGDIEAACRTACQ 150
.||||.||:|||||||||||:|||.|||||||||::||..:..|...|..
BL01988___yng 101 TFIGPPPDVIAKMGSKIEARQAMEQAGVPVVPGVTKSLSGLNEARALAES 150
BSNT_03019___ 151 IGYPVMLKASAGGGGIGMQRVENEEALKKAYEGNKKRAADFFGDGSMYIE 200
||||||||||.||||||||.:.||..|:||||||:||||||||||:||||
BL01988___yng 151 IGYPVMLKASFGGGGIGMQLIRNESELEKAYEGNQKRAADFFGDGAMYIE 200
BSNT_03019___ 201 KVIEHARHIEVQLLADQHGHTVHLFERDCSVQRRHQKVIEEAPSPFVDDE 250
|.||.|||||:|:|.|::.:.|:|:|||||:|||.||:|||||:|..|:.
BL01988___yng 201 KYIEQARHIEIQILTDKYENAVYLWERDCSIQRRQQKIIEEAPAPLFDET 250
BSNT_03019___ 251 LRMKIGQTAVKAAKAIGYTNAGTIEFIVDQKQNFYFLEMNTRLQVEHPVT 300
:|.|:|:.|||||.:|||.|||||||:||::.:|||||||||||||||||
BL01988___yng 251 MRTKLGEAAVKAALSIGYVNAGTIEFLVDKENHFYFLEMNTRLQVEHPVT 300
BSNT_03019___ 301 EEITGLDLVEQQLRIAAGHTLTFSQKDIQRNGHAIEVRIYAEDPKTFFPS 350
||||||||||:||.||||..|:..||||:|:||||||||.||||||||||
BL01988___yng 301 EEITGLDLVEEQLNIAAGKPLSHKQKDIRRDGHAIEVRICAEDPKTFFPS 350
BSNT_03019___ 351 PGTITAFSLPDQKGVRHECAVAKDSTVTPFYDPMIAKMIVKGQTRTEAIE 400
||.||...||:|..||||||.|...|:||:||||||||||||.:|.|||.
BL01988___yng 351 PGRITDLKLPEQPNVRHECAAAPGMTITPYYDPMIAKMIVKGSSREEAIC 400
BSNT_03019___ 401 KLETSLRDYRVEGIKTNLPLLIQAAATKAFKEGDVTTDFLKQHL-- 444
.|..:|..|:|:|||||:|||....::..|::|.|.|||:.::.
BL01988___yng 401 TLAEALSQYQVKGIKTNIPLLEDIVSSDEFRKGGVQTDFISRYQSK 446
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