Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02248 and BL01974

See DNA alignment / Visit BSNT_02248 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:45
# Commandline: needle
#    -asequence pep-align/BSNT_02248___ykoS.1.5803.seq
#    -bsequence pep-align/BL01974___ykoR.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02248___ykoS-BL01974___ykoR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02248___ykoS-BL01974___ykoR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02248___ykoS
# 2: BL01974___ykoR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 566
# Identity:     395/566 (69.8%)
# Similarity:   473/566 (83.6%)
# Gaps:           2/566 ( 0.4%)
# Score: 2176.5
# 
#
#=======================================

BSNT_02248___      1 MLRLMRQQKKETYYLWIALFLLLLYVSPLFILKEDAHIRVHDNLDSNIAW     50
                     |...:::..:|..||..|..::||||.||:||.|||||||||||||||||
BL01974___yko      1 MSLFVKKLSREKRYLIFAFSVILLYVLPLYILNEDAHIRVHDNLDSNIAW     50

BSNT_02248___     51 YKVLADSGEIVGKVDAAIPQIINGLPRDAFGTEWSGIVWLHAFFSSMTAY    100
                     |||||:||:::|.|.|.||||||||||||:||||||||||||.|.|||||
BL01974___yko     51 YKVLAESGQLLGGVKAVIPQIINGLPRDAYGTEWSGIVWLHALFPSMTAY    100

BSNT_02248___    101 AISQTVTRVVAFFGMYVLLKKHIIPEPKAAFIRIGVSLAFALTPFWPSGM    150
                     |:|||:|||.||.|||:|||.|:|.:.||.||||.|||||||||||||||
BL01974___yko    101 ALSQTITRVFAFVGMYLLLKSHVIRDEKAYFIRIAVSLAFALTPFWPSGM    150

BSNT_02248___    151 LSTLGYPLALWAFLNIRKGDISWREWLTLGLLPLYSSFVLGFFFFLAGMA    200
                     |||||:|||||||||||.|:.||:||.||.|||||||||||||||||.::
BL01974___yko    151 LSTLGHPLALWAFLNIRAGNDSWKEWSTLALLPLYSSFVLGFFFFLAAVS    200

BSNT_02248___    201 CFWLYDAITKRRWNLMFLGSIAFMTSIYLFVEYRLVYSMLFEHAPMHRIE    250
                     ..||||.:|||.:||.||||||.||.|:|.:|||||||:......|||:|
BL01974___yko    201 LIWLYDLVTKRSFNLRFLGSIALMTGIFLAIEYRLVYSVFASGETMHRVE    250

BSNT_02248___    251 FISSRHDVWHSLRLSVKNFVYGHNHVMTVHTVVILPILLVVFAALLFKRN    300
                     |||||||:.||.|||.||||.||||||||||.||||::::.|..::.::.
BL01974___yko    251 FISSRHDILHSFRLSFKNFVLGHNHVMTVHTAVILPLIVLTFGLVVARQR    300

BSNT_02248___    301 RTKP--ENVYLFLCVLNYGLSLWYAFWFNKIWAVPKQKFAFLAEFNFARF    348
                     :.:|  |.:::||.:|||.||||||.||||:||:||:|.:.|:.||||||
BL01974___yko    301 KKRPSEEKLFIFLFILNYALSLWYALWFNKLWALPKEKISLLSAFNFARF    350

BSNT_02248___    349 HFLRPLVIYVSFALALYLIWRMGKGWKWLVYAAVAAQLMVLAPFNEEYTY    398
                     |||||||||.|||:|.|::|:|||.|:..|:||:.|||:||.||:||.||
BL01974___yko    351 HFLRPLVIYASFAVACYILWKMGKRWRRFVHAALIAQLLVLIPFHEELTY    400

BSNT_02248___    399 GVHYNAPTFKEFYASEQFKEIKEYIGRPQDSYRVASIGLHPSIAQYNGFY    448
                     |.:::||:|:|||||:|||:||.:||||.||||||||||||:||||||||
BL01974___yko    401 GAYHHAPSFREFYASDQFKQIKRFIGRPTDSYRVASIGLHPAIAQYNGFY    450

BSNT_02248___    449 TLDTYNNLYPLSYKYEFRKIIEKELEKNSRLKQYFDEWGSRCYLFVDELG    498
                     |||||.|:|||.|||:|||||.|||:||..||:|||||||||||||||||
BL01974___yko    451 TLDTYANIYPLKYKYQFRKIIAKELDKNPALKRYFDEWGSRCYLFVDELG    500

BSNT_02248___    499 KRYDFKKNSKKTINNLQLNTDVFKKMGGRYIFSSVPIMNAEQNHLALVKT    548
                     |.|.|||::||.|.||:|||:.||||||:||||||||||||||.||.:|.
BL01974___yko    501 KHYAFKKSTKKKITNLELNTEAFKKMGGQYIFSSVPIMNAEQNKLAFLKR    550

BSNT_02248___    549 FDHKDSAWRIYLYETR    564
                     |.|..|||.||:||.:
BL01974___yko    551 FSHPQSAWNIYVYEAK    566


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_02248 and BL01974

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
