Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05140 and BL01954

See DNA alignment / Visit BSNT_05140 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:15
# Commandline: needle
#    -asequence pep-align/BSNT_05140___yvbU.1.5803.seq
#    -bsequence pep-align/BL01954___cysL.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05140___yvbU-BL01954___cysL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05140___yvbU-BL01954___cysL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05140___yvbU
# 2: BL01954___cysL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 315
# Identity:      77/315 (24.4%)
# Similarity:   132/315 (41.9%)
# Gaps:          42/315 (13.3%)
# Score: 245.5
# 
#
#=======================================

BSNT_05140___      1 MTITQLKVFVKIAETGSFTKAGQALNMTQPAVSHAISAIEAELDVKLIIR     50
                     |....||.||.:||..:|||..:.|.|:||:||..|..:|.|...||..|
BL01954___cys      1 MHYDALKTFVTLAEVKNFTKTAELLLMSQPSVSMHIKNLEKEFQTKLFER     50

BSNT_05140___     51 DRRNGLMLTDTGKQILVHIREVLKGIEKVEQVAAAEKGLELGTIHIGTFS    100
                     ..:. |.:|.||:.:....::::...|:..|..........|.:.||...
BL01954___cys     51 SPKY-LKITPTGEILYDRAKQMITIYEQTRQDILDHHNSIKGELKIGASF     99

BSNT_05140___    101 TASAYFMPKLISEFKQKYPKLELVLHEGTVNEVKEWLHTRMIDVGILLYP    150
                     |...|.:|.|:.:.:::||:|||....|...|:.:.:....:|:|::...
BL01954___cys    100 TIGEYILPSLLFDLQKEYPELELKAVIGNTEEIVQSVRLYKVDIGLIEGQ    149

BSNT_05140___    151 TEEMEY-IH-LKKDKMAVVLRDDHPLAGHSAITLKDLDHEPMIVCD--GG    196
                     |.|.|. :| ..:|::.:....|||||....:|:.||.::..:..:  .|
BL01954___cys    150 TNEKELSVHAFMQDELFIAASSDHPLAAKQDVTISDLQNQTWVTREVGSG    199

BSNT_05140___    197 YESPFVDMFRQAGATLHPAFTVYNINTSISMIREGLGLAILSEMSMSGMP    246
                     .......:.|..|..:....|:.:.......:..|:||::||        
BL01954___cys    200 TREYLNHVIRSNGLKVKSFLTISSNQGIKETLMTGIGLSLLS--------    241

BSNT_05140___    247 LPEHVVTRELDPQVYRDVQ---LAVPSLKEASL----------------A    277
                               ...:.||||   |:|..||..:.                .
BL01954___cys    242 ----------GSVIERDVQHGNLSVIRLKNQTFNRTLSYIYSPVMQDKKN    281

BSNT_05140___    278 AKLFIEMAKELFGAE    292
                     .|.||....:...::
BL01954___cys    282 VKTFINALNKRTSSK    296


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