Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05141 and BL01951

See DNA alignment / Visit BSNT_05141 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:15
# Commandline: needle
#    -asequence pep-align/BSNT_05141___yvbV.1.5803.seq
#    -bsequence pep-align/BL01951___yoaV.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05141___yvbV-BL01951___yoaV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05141___yvbV-BL01951___yoaV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05141___yvbV
# 2: BL01951___yoaV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 309
# Identity:      92/309 (29.8%)
# Similarity:   147/309 (47.6%)
# Gaps:          23/309 ( 7.4%)
# Score: 366.0
# 
#
#=======================================

BSNT_05141___      1 MKQLSKTRTALLLAFLVIMWGVNWPLSKAALAYSPPLLFAGIRTLIGGLL     50
                          ..:..|.:..:.::||..|...|.|:...||:||:.:|..||.:.
BL01951___yoa      1 -----MFKVLLGIISVTLIWGYTWVTMKIAITDIPPVLFSALRLFIGAVP     45

BSNT_05141___     51 LVIVALPRIHKLRL-KETWPIYLVSALLNITLFYGLQTIGLNYLPAGLFS     99
                     |.::.|.:..|..: ||....|||.:||....:.|:.|.|:.::.:|..|
BL01951___yoa     46 LFVILLIKGRKRSIGKENIKHYLVMSLLMGLGYMGVLTYGMQFVDSGKTS     95

BSNT_05141___    100 AIVFFQPVLMGVFSWLWLGESMFVMKVIGLILGFAGVAVISAAGFGGHIS    149
                     .:|:..|:.:.|.|...|.|.:.|.|::||..|..|:..|...|. .|:.
BL01951___yoa     96 VLVYTMPIFVTVISHFKLNEKINVYKMLGLFSGLIGLLFILGGGI-LHVD    144

BSNT_05141___    150 ---VIGILLALGSAISWALGTVYMKKTGSRVDSIWMVALQLTIGSVFLLI    196
                        :.|.|..|.:|:||.:..||.|......|.|.|.|.||..|:|.|||
BL01951___yoa    145 QNVIFGELCVLIAALSWGVANVYSKLKFKNTDMIHMNAWQLLTGAVMLLI    194

BSNT_05141___    197 SGFWTESFSAIQWTAPFITSLLFISVFVIALGWLVFFTLVGSGEASKVAS    246
                     ..|..|....|.|:...|.||||..:|..||.::::|.::...||||.:.
BL01951___yoa    195 FSFILEPSRPIHWSNEAILSLLFNGLFSTALTFVIWFWILNQIEASKASM    244

BSNT_05141___    247 YTFLIPLISIVASSIFLHEPLTLSLLAGLLLIVTSICLVNTKSKAQKAAA    296
                     ....:|::.::...:.||||:|.|:|.|..:|...|.:...:.|..    
BL01951___yoa    245 ALMFVPVLGLLFGWLQLHEPVTFSILIGAFMICIGIFMNTYQFKKV----    290

BSNT_05141___    297 IGINEKAAQ    305
                              
BL01951___yoa    290 ---------    290


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