Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_02178 and BL01936

See DNA alignment / Visit BSNT_02178 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:40
# Commandline: needle
#    -asequence pep-align/BSNT_02178___ykcC.1.5803.seq
#    -bsequence pep-align/BL01936___ykcC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02178___ykcC-BL01936___ykcC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02178___ykcC-BL01936___ykcC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02178___ykcC
# 2: BL01936___ykcC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 325
# Identity:     230/325 (70.8%)
# Similarity:   270/325 (83.1%)
# Gaps:           2/325 ( 0.6%)
# Score: 1205.5
# 
#
#=======================================

BSNT_02178___      1 MSRHIQYSIVVPVYNEELVIHETYQRLKEVMDQTKENYELLFVNDGSKDR     50
                     |.:.:.:|||||||||..|:..||.|||.|||.|.:.|||:||||||.|.
BL01936___ykc      1 MQKQVTFSIVVPVYNEAEVLQSTYDRLKTVMDSTGDPYELIFVNDGSSDD     50

BSNT_02178___     51 SIEILREHSLIDPRVKIIDFSRNFGHQIAITAGMDYAQGNAIVVIDADLQ    100
                     ||..|:..:..|..||.|:||||||||||||||.|||.|.||||||||||
BL01936___ykc     51 SIHTLKSLAQSDQAVKCINFSRNFGHQIAITAGTDYAAGEAIVVIDADLQ    100

BSNT_02178___    101 DPPELILDMIEKWKEGYEVVYAVRTKRKGETFFKKQTAAMFYRLLSGMTD    150
                     |||||||:|.|||::|::|||||||||:|||||||||||||||:|..:||
BL01936___ykc    101 DPPELILEMAEKWRQGFDVVYAVRTKREGETFFKKQTAAMFYRILRKLTD    150

BSNT_02178___    151 IDIPIDTGDFRLMDRKVCDEMKRLKEKNPFVRGLVSWVGFKQTAVEYVRD    200
                     :|||:||||||||||||.:||.:||||||||||||||:|||||||.|.|.
BL01936___ykc    151 VDIPVDTGDFRLMDRKVVNEMNKLKEKNPFVRGLVSWLGFKQTAVYYERH    200

BSNT_02178___    201 ERLAGETKYPLKKMLKLSMDGITTFSHKPLKLASYAGILMSGAGFLYMFI    250
                     ||||||||||||||||||:||||:||.:|||||||:||::|..||:|.||
BL01936___ykc    201 ERLAGETKYPLKKMLKLSLDGITSFSFQPLKLASYSGIVLSAIGFIYAFI    250

BSNT_02178___    251 VLYLKLFTDSTITGWSSLIVIQLLFSGIVLLILGVIGEYIGRIYDEAKDR    300
                     |:.:||||.||||||||:|::|.||||.:|:|||.|||||||||||.|||
BL01936___ykc    251 VVCMKLFTTSTITGWSSMIILQCLFSGFILIILGAIGEYIGRIYDEVKDR    300

BSNT_02178___    301 PLYIVQKSYGIESKRLYR--DQHMS    323
                     ||||:...||.|.:|..|  .:|:.
BL01936___ykc    301 PLYIIDGKYGFEEQRRARAPQRHIM    325


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.