Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05962 and BL01934
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:02
# Commandline: needle
# -asequence pep-align/BSNT_05962___yxjG.1.5803.seq
# -bsequence pep-align/BL01934___yxjG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05962___yxjG-BL01934___yxjG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05962___yxjG-BL01934___yxjG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05962___yxjG
# 2: BL01934___yxjG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 378
# Identity: 293/378 (77.5%)
# Similarity: 328/378 (86.8%)
# Gaps: 2/378 ( 0.5%)
# Score: 1550.0
#
#
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BSNT_05962___ 1 MSQQTTPAEQKSLQRKKPPFRADQVGSLLRSEPVKKARLQKAAGDITAEQ 50
|:|.|...:| :..||..|:||||||||||||||||||||||.|:|:|||
BL01934___yxj 1 MTQSTDVLKQ-TPGRKIGPYRADQVGSLLRSEPVKKARLQKANGEISAEQ 49
BSNT_05962___ 51 LRQIENDEIIRIVEKQKETGLNVVTDGEFRRAWWHFDFLENLDGVEPFTP 100
||::||:||.||||||||.||..||||||||:||||||||.|||||.:|.
BL01934___yxj 50 LREVENEEIKRIVEKQKEIGLKAVTDGEFRRSWWHFDFLEGLDGVEGYTA 99
BSNT_05962___ 101 EQGIQFHNVQTKARGIKVTGDIDFSTHPMLEDYSFLHSIAGDATPKMTIP 150
::|||||||:||.||||||..:||:.|||||||.|||.|||..|||||||
BL01934___yxj 100 DKGIQFHNVETKPRGIKVTSKVDFTNHPMLEDYKFLHDIAGTHTPKMTIP 149
BSNT_05962___ 151 SPNMLFFRGKLEKGAYKNDYHLFQHDVSKAYKKAIQAFYDRGCRYLQLDD 200
|||||||||||.:..|: |...|.|||::||||||:||||.|||||||||
BL01934___yxj 150 SPNMLFFRGKLGESPYE-DLDEFHHDVAQAYKKAIRAFYDAGCRYLQLDD 198
BSNT_05962___ 201 TAWAVFLSEKGLKQIEAFGTTPDELRQLFAKSINDAIADRPDDLTVTMHI 250
|||:||.|:||.:||:|||..||||||.||.:||:|:..|||||||||||
BL01934___yxj 199 TAWSVFFSDKGHEQIKAFGRQPDELRQSFANTINEAVEGRPDDLTVTMHI 248
BSNT_05962___ 251 CRGNFQSTWTAEGGYDAAAETIFDGLNLDGLFLEYDDSRSGGFEPLRYVK 300
|||||||||.||||||||||||||||||||||||:||.|||||||||||:
BL01934___yxj 249 CRGNFQSTWVAEGGYDAAAETIFDGLNLDGLFLEFDDERSGGFEPLRYVQ 298
BSNT_05962___ 301 RPDLQLVLGLVTSKFGELEHPDDVKRRIEEASRYVSLDQLCLSPQCGFAS 350
|.|||:||||:||||||||:|||:||||||||||..|:||||||||||||
BL01934___yxj 299 RKDLQIVLGLITSKFGELENPDDIKRRIEEASRYADLNQLCLSPQCGFAS 348
BSNT_05962___ 351 TEEGNKLTEEQQWAKLRHVVEIANDVWK 378
|||||.|||||||.|||||||||.||||
BL01934___yxj 349 TEEGNLLTEEQQWEKLRHVVEIAEDVWK 376
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