Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05962 and BL01934
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:02
# Commandline: needle
# -asequence dna-align/BSNT_05962___yxjG.1.5803.seq
# -bsequence dna-align/BL01934___yxjG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05962___yxjG-BL01934___yxjG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05962___yxjG-BL01934___yxjG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05962___yxjG
# 2: BL01934___yxjG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1165
# Identity: 845/1165 (72.5%)
# Similarity: 845/1165 (72.5%)
# Gaps: 62/1165 ( 5.3%)
# Score: 2896.0
#
#
#=======================================
BSNT_05962___ 1 ATGTCACAA-CAAACAACACCCG-----CAGAA-CAAAAATCACTTCAAA 43
|||.||||| ||| ||| |.||| |||| |.|.|..||
BL01934___yxj 1 ATGACACAATCAA-------CCGATGTACTGAAGCAAA---CGCCTGGAA 40
BSNT_05962___ 44 GAAAAAAACCG--CCGTTTCGCGCGGATCAAGTCGGAAGCCTGTTGAGAT 91
| |||||.|| ||||...|.||.|||||.||.||.||.||.||.||.|
BL01934___yxj 41 G--AAAAATCGGACCGTACAGAGCTGATCAGGTGGGCAGTCTTTTAAGGT 88
BSNT_05962___ 92 CTGAGCCCGTTAAAAAAGCGCGGCTGCAAAAAGCGGCCGGCGATATTACG 141
||||||||||.|||||||||||.||.|||||||||..||||||.||||..
BL01934___yxj 89 CTGAGCCCGTAAAAAAAGCGCGCCTCCAAAAAGCGAACGGCGAAATTAGC 138
BSNT_05962___ 142 GCTGAGCAGCTTCGCCAGATCGAAAACGATGAAATTATCCGCATTGTGGA 191
|||||.||..|.|||.|..||||||||||.||.||.|..||||||||.||
BL01934___yxj 139 GCTGAACAATTGCGCGAAGTCGAAAACGAAGAGATCAAGCGCATTGTCGA 188
BSNT_05962___ 192 AAAACAGAAGGAAACCGGCCTGAACGTCGTGACAGACGGTGAATTCCGCA 241
|||.||.||.||||.|||.||.||.|.||||||||||||.||||||||||
BL01934___yxj 189 AAAGCAAAAAGAAATCGGTCTTAAAGCCGTGACAGACGGGGAATTCCGCA 238
BSNT_05962___ 242 GAGCATGGTGGCACTTTGATTTCCTGGAA-AACTTAGATGGCGTTGAGCC 290
|..||||||||||.||.|||||.||.||| .|||| ||.|||||.||...
BL01934___yxj 239 GGTCATGGTGGCATTTCGATTTTCTTGAAGGACTT-GACGGCGTAGAAGG 287
BSNT_05962___ 291 GTTTACTCCTGAGCAA-GGCATTCAATTCCATAACGTACAGACAAAAGCA 339
.|.|||..|.|| ||| |||||||||||.|||||.||..|.||.||..|.
BL01934___yxj 288 ATATACAGCGGA-CAAGGGCATTCAATTTCATAATGTTGAAACGAAGCCG 336
BSNT_05962___ 340 CGCGGCATTAAAGTCACAGGTGATATCGACTTTTCAACTCACCCAATGCT 389
||||||||.|||||.|||.|..|..||||||||.|||..||.||.|||||
BL01934___yxj 337 CGCGGCATCAAAGTAACAAGCAAAGTCGACTTTACAAACCATCCGATGCT 386
BSNT_05962___ 390 TGAAGATTACTCATTTCTCCATAGCATTGCCGGTGACGC-GACGCCAAAG 438
.||||||||...||||||.|||...|||| |||..||.| .|||||.||.
BL01934___yxj 387 GGAAGATTATAAATTTCTTCATGATATTG-CGGGCACACATACGCCGAAA 435
BSNT_05962___ 439 ATGACGATTCCAAGCCCGAATATGCTGTTTTTCCGCGGAAA-ATTGGAAA 487
|||||||||||.|||||||||||||||||||||.|.||||| .|||||.|
BL01934___yxj 436 ATGACGATTCCGAGCCCGAATATGCTGTTTTTCAGAGGAAAGCTTGGAGA 485
BSNT_05962___ 488 AAG---GTGCATACAAAAACGACTATCACCTT------TTCCAGCATGAT 528
||| || |.||..|| ||| ||.||.||.|||
BL01934___yxj 486 AAGCCCGT----------ATGAGGAT---CTTGATGAATTTCATCACGAT 522
BSNT_05962___ 529 GTATCCAAAGCATATAAAAAAGCGATTCAAGCGTTTTATGACAGAGGCTG 578
|||.|..|.||.||.|||||||||||.|..||.|||||.||....|||||
BL01934___yxj 523 GTAGCTCAGGCTTACAAAAAAGCGATCCGCGCATTTTACGATGCCGGCTG 572
BSNT_05962___ 579 CCGCTACCTCCAGCTTGATGATACAGCGTGGGCCGTTTTCTTATCTGAAA 628
||||||..|.|||||.|||||.||.||.|||.||||.||.||.||.||.|
BL01934___yxj 573 CCGCTATTTGCAGCTGGATGACACGGCCTGGTCCGTATTTTTCTCAGACA 622
BSNT_05962___ 629 AAGG-CTTAAAACAAATCGAAGCGTTCGGAACAAC--GCCTGACGAGCTT 675
|||| |.| .|.||.|||.||||.||||| |..| ||||||.||.||.
BL01934___yxj 623 AAGGACAT-GAGCAGATCAAAGCTTTCGG--CCGCCAGCCTGATGAACTG 669
BSNT_05962___ 676 CGTCAG-CTGTTTGCGAAATCCATTAATGACGCGATTGCAGACCGTCCTG 724
||.||| || ||.||.||..|.||||||||.||..|||.||..||.||.|
BL01934___yxj 670 CGCCAGTCT-TTCGCCAACACGATTAATGAAGCAGTTGAAGGGCGCCCGG 718
BSNT_05962___ 725 ATGACTTGACCGTAACCATGCATATTTGCCGCGGCAACTTCCAGTCCACT 774
|.||.|||||.||.||||||||.||.||||||||||||||||||||.||.
BL01934___yxj 719 ACGATTTGACGGTCACCATGCACATCTGCCGCGGCAACTTCCAGTCGACA 768
BSNT_05962___ 775 TGGACAGCGGAAGGCGGCTATGACGCAGCAGCCGAAACCATTTTTGACGG 824
|||...||||||||||||||.||.||.||.||.|||||.|||||.|||||
BL01934___yxj 769 TGGGTGGCGGAAGGCGGCTACGATGCGGCTGCTGAAACGATTTTCGACGG 818
BSNT_05962___ 825 CTTGAATCTTGACGGCCTTTTCTTAGAGTATGATGATTCACGCTCAGGCG 874
..|.|||.|.|||||.||||||.|.||.|.||||||....|||||.||||
BL01934___yxj 819 ACTCAATTTAGACGGACTTTTCCTTGAATTTGATGACGAGCGCTCCGGCG 868
BSNT_05962___ 875 GATTTGAGCCGCTCCGTTACGTAAAACGGCCTGATCTT-CAGCTTGTTCT 923
|.||.||.|||||.||.|||||..|||||...|| ||| ||..|.||.||
BL01934___yxj 869 GCTTCGAACCGCTTCGCTACGTCCAACGGAAAGA-CTTGCAAATCGTCCT 917
BSNT_05962___ 924 TGGCTTAGTGACATCTAAATTCGGTGAGCTTGAACATCCGGACGATGTAA 973
.||.|||.|.||||||||||||||.|||||||||.|.|||||.|||.|.|
BL01934___yxj 918 CGGTTTAATTACATCTAAATTCGGCGAGCTTGAAAACCCGGATGATATTA 967
BSNT_05962___ 974 AACGCCGTATCGAAGAAGCATCCCGTTATG-TAAGCTTAGACCAGCTTTG 1022
|.||.||.||.|||||.||.|||||.|||| ..|.||.| |||||||.||
BL01934___yxj 968 AGCGGCGCATTGAAGAGGCGTCCCGATATGCCGATCTGA-ACCAGCTGTG 1016
BSNT_05962___ 1023 CCTCAGCCCTCAATGCGGATTCGCTTCAACTGAGGAAGGCAACAAGCTGA 1072
|.|.|||||.||.|||||.||.||||||||.||.||.||||||..|||.|
BL01934___yxj 1017 CTTGAGCCCGCAGTGCGGCTTTGCTTCAACGGAAGAGGGCAACCTGCTTA 1066
BSNT_05962___ 1073 CTGAAGAACAGCAATGGGCGAAGCTCCGCCATGTGGTTGAGATCGCTAAT 1122
|.|||||||||||.||||..||.||.||||||||.||.|||||||||.|.
BL01934___yxj 1067 CCGAAGAACAGCAGTGGGAAAAACTGCGCCATGTCGTCGAGATCGCTGAA 1116
BSNT_05962___ 1123 GATGTTTGGAAATAA 1137
||.||.|||||||||
BL01934___yxj 1117 GACGTATGGAAATAA 1131
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