Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04830 and BL01932

See DNA alignment / Visit BSNT_04830 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:02
# Commandline: needle
#    -asequence pep-align/BSNT_04830___yurN.1.5803.seq
#    -bsequence pep-align/BL01932___yurN.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04830___yurN-BL01932___yurN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04830___yurN-BL01932___yurN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04830___yurN
# 2: BL01932___yurN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 322
# Identity:     103/322 (32.0%)
# Similarity:   184/322 (57.1%)
# Gaps:          40/322 (12.4%)
# Score: 492.5
# 
#
#=======================================

BSNT_04830___      1 ----------------------MVNQNKIIPYLFLVPALVFL-LFVYIPI     27
                                           :..::.::.|.||.|||:.| :|:.||.
BL01932___yur      1 MNKIPLKEARTAFPLKKIPASKIGWRDNVLAYTFLGPALLILSVFLVIPS     50

BSNT_04830___     28 FENVFLSLFQWSSFSPE-KTFIGLKNYVELFHDPVFYQALTNNVLYAVIS     76
                     ...|:.:...:...:|: :.|:|..|:::||.||:|.::|:|.:.:.|:.
BL01932___yur     51 IMAVYYAFTDYYLLTPDLRKFVGFDNFIKLFKDPIFLKSLSNTLKFVVLV    100

BSNT_04830___     77 IVCQVFGGLILAAVLEDKLVRKWSPFFRTVFFLPVVISMTVIALLFDFIY    126
                     |..|:...|.||.:|..|  ||.:.||:..:|.|||:|:.||::|:.::.
BL01932___yur    101 IPLQIGAALGLALLLNKK--RKANTFFKVAYFSPVVMSLVVISVLWLYLL    148

BSNT_04830___    127 NPETGLLNQLLQAIGLDQLTRAWLGDDSTAMLSVIFVSQWQSVGYIAMLY    176
                     ||..|::|.:|..:||.  .:.:|...:.|:.:::|||.||..|:..:::
BL01932___yur    149 NPNEGMINNVLTHVGLP--PQPFLTSPNQAIFTIVFVSVWQGAGFQMLIF    196

BSNT_04830___    177 IVSIQKIPDELYEAARLDGAGKIQQFFHITVPQTKEMSFVAVVMTLTGAF    226
                     :..:|.||.::||||:|||..|.|:|.:||:|..|..|....:.||..||
BL01932___yur    197 LAGLQNIPGDVYEAAQLDGMNKWQRFIYITLPLLKPTSVFIFITTLISAF    246

BSNT_04830___    227 TVFNEPYILTGGGPGNASEVLSTFLYKSAFTEDMMGYASAIA----TVVL    272
                     .:..:|.::|.|||.|::..:..::|::.||:.|:||||:||    |::.
BL01932___yur    247 KLLVQPMVMTQGGPVNSTMTVVYYIYQTGFTDRMVGYASSIALLFGTIIG    296

BSNT_04830___    273 IITLALSLMQMKFFKTGKEE--    292
                     ::|||    |.|..|  ::|  
BL01932___yur    297 LVTLA----QRKLVK--EDEGG    312


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