Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06073 and BL01925
See
DNA alignment /
Visit
BSNT_06073 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:04
# Commandline: needle
# -asequence pep-align/BSNT_06073___yxeC.1.5803.seq
# -bsequence pep-align/BL01925.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06073___yxeC-BL01925.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06073___yxeC-BL01925.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06073___yxeC
# 2: BL01925
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 222
# Identity: 42/222 (18.9%)
# Similarity: 75/222 (33.8%)
# Gaps: 91/222 (41.0%)
# Score: 196.5
#
#
#=======================================
BSNT_06073___ 1 --MGITKRGAAWEWLHSWWMLFIFMPFAITSFFAFLFIGIKVRNRKWIMY 48
.|.|.:|..||...|.|:||:|.||...::.:|.:|..:.:.:||::.
BL01925 1 MANGYTNKGVKWELFQSIWVLFVFTPFGFLNWVSFFYIFARAKQKKWLIA 50
BSNT_06073___ 49 GIIYFFIFAFGFVLSDLP----GVFIVVPLWAVTIIHGFKVRPLYLIQLD 94
|.|||.||.|..:.:..| .:.:::..|.|:|:|..||||.:||:|:
BL01925 51 GWIYFAIFLFTILSNGTPLFNAAMVLLIIGWGVSIVHALKVRPEFLIRLE 100
BSNT_06073___ 95 -------------------VYKDHVEARAFAEARSEAESRFHAPKQSIQD 125
.|.:...||. ::...::|.:....:.|::|
BL01925 101 SIQQLKRAEIDQLRKSLKNEYPETAAART-SQTDKQSERKIDINQASVED 149
BSNT_06073___ 126 IHIRKEQ------------------------------------------- 132
|....:.
BL01925 150 IASIPQLGIILAKKAVAMREEIGGFSSIDHFGEQLGLKPHVLLKVEPYLS 199
BSNT_06073___ 132 ---------------------- 132
BL01925 200 FSKPVDRRDRKDENAEGRVLDI 221
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.