Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03466 and BL01892

See DNA alignment / Visit BSNT_03466 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:27
# Commandline: needle
#    -asequence pep-align/BSNT_03466___ypuD.1.5803.seq
#    -bsequence pep-align/BL01892.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03466___ypuD-BL01892.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03466___ypuD-BL01892.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03466___ypuD
# 2: BL01892
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 114
# Identity:      77/114 (67.5%)
# Similarity:    97/114 (85.1%)
# Gaps:           0/114 ( 0.0%)
# Score: 413.0
# 
#
#=======================================

BSNT_03466___      1 MGRIKTKITILLVLLLLLAGGYMYINDVELKDVPTAIGQTLSSEEEEYTI     50
                     ||:||.|:|:||||..:||||:.|:.:..::||.||:.||:||||:.|||
BL01892            1 MGKIKFKLTVLLVLAAVLAGGFYYLKNGSVQDVSTALSQTVSSEEKNYTI     50

BSNT_03466___     51 QEYKVTKIDGSEYHGVAENGTKIIFNGKKLNQDLSDIKEGDKIKAYFSKS    100
                     .:||:|||||:|||||::||||||||.|.|||||||||||||:|||||.:
BL01892           51 YQYKITKIDGTEYHGVSDNGTKIIFNAKNLNQDLSDIKEGDKVKAYFSNA    100

BSNT_03466___    101 KRIDGLIKVAKVND    114
                     .||||||||.||.:
BL01892          101 NRIDGLIKVVKVAE    114


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