Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03460 and BL01888

See DNA alignment / Visit BSNT_03460 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:27
# Commandline: needle
#    -asequence pep-align/BSNT_03460___ribH.1.5803.seq
#    -bsequence pep-align/BL01888___ribH.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03460___ribH-BL01888___ribH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03460___ribH-BL01888___ribH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03460___ribH
# 2: BL01888___ribH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 154
# Identity:     121/154 (78.6%)
# Similarity:   138/154 (89.6%)
# Gaps:           0/154 ( 0.0%)
# Score: 635.0
# 
#
#=======================================

BSNT_03460___      1 MNIIQGNLVGTGLKIGIVVGRFNDFITSKLLSGAEDALLRHGVDTNDIDV     50
                     ||.|:|:::||.|||||||.||||||||||||||||.||||||..:||||
BL01888___rib      1 MNKIEGHVIGTDLKIGIVVSRFNDFITSKLLSGAEDTLLRHGVKADDIDV     50

BSNT_03460___     51 AWVPGAFEIPFAAKKMAETKKYDAIITLGTVIRGATTHYDYVCNEAAKGI    100
                     ||||||||||..||||||||||||:|||||||||||:|||||||||||||
BL01888___rib     51 AWVPGAFEIPLIAKKMAETKKYDAVITLGTVIRGATSHYDYVCNEAAKGI    100

BSNT_03460___    101 AQAANTTGVPVIFGIVTTENIEQAIERAGTKAGNKGVDCAVSAIEMANLN    150
                     |.::.:||||||||::||:.||||:|||||||||||.:.|.:|||||||.
BL01888___rib    101 AASSMSTGVPVIFGVLTTDTIEQAVERAGTKAGNKGAEAAAAAIEMANLT    150

BSNT_03460___    151 RSFE    154
                     ||.:
BL01888___rib    151 RSLQ    154


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