Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03456 and BL01886

See DNA alignment / Visit BSNT_03456 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:27
# Commandline: needle
#    -asequence pep-align/BSNT_03456___scpA.1.5803.seq
#    -bsequence pep-align/BL01886___scpA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03456___scpA-BL01886___scpA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03456___scpA-BL01886___scpA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03456___scpA
# 2: BL01886___scpA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 252
# Identity:     212/252 (84.1%)
# Similarity:   232/252 (92.1%)
# Gaps:           2/252 ( 0.8%)
# Score: 1069.0
# 
#
#=======================================

BSNT_03456___      1 MEEYQVKIDTFEGPLDLLLHLINRLEIDIYDIPVAKITEQYLLYVHTMRV     50
                      .||||||:.|||||||||||||||||||||||||||||||||||||||.
BL01886___scp      1 -MEYQVKIEAFEGPLDLLLHLINRLEIDIYDIPVAKITEQYLLYVHTMRE     49

BSNT_03456___     51 LELDMASEYLVMAATLLSIKSRMLLPKQEEELFEDELL-EEEDPREELIE     99
                     ||||:||||||||||||||||||||||||||||::|.| |||||||||||
BL01886___scp     50 LELDVASEYLVMAATLLSIKSRMLLPKQEEELFDEEFLEEEEDPREELIE     99

BSNT_03456___    100 KLIEYRKYKDAAKDLKEREEERQKSFTKPPSDLSEYAKEVKQSEQKLSVT    149
                     |||||||||.||::||||||||||:|.|||||||:||||:|.||||||||
BL01886___scp    100 KLIEYRKYKSAAQNLKEREEERQKAFAKPPSDLSDYAKEIKLSEQKLSVT    149

BSNT_03456___    150 VYDMIGAFQKVLKRKKINRPMETTITRQDIPIEARMNEIVHSLKSRGTRI    199
                     ||||:|||||||.|||||||.||.|:||:||||.||.:||..|||...|:
BL01886___scp    150 VYDMLGAFQKVLNRKKINRPSETRISRQEIPIEERMTQIVDCLKSSRKRM    199

BSNT_03456___    200 NFMDLFPYEQKEHLVVTFLAVLELMKNQLVLIEQEHNFSDIYITGSESIH    249
                     :||:||||||||||||||||:||||||||::||||||||||||||||:||
BL01886___scp    200 HFMELFPYEQKEHLVVTFLAILELMKNQLIIIEQEHNFSDIYITGSEAIH    249

BSNT_03456___    250 GA    251
                     .|
BL01886___scp    250 DA    251


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