Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03450 and BL01880
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:26
# Commandline: needle
# -asequence pep-align/BSNT_03450___spmA.1.5803.seq
# -bsequence pep-align/BL01880___spmA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03450___spmA-BL01880___spmA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03450___spmA-BL01880___spmA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03450___spmA
# 2: BL01880___spmA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 196
# Identity: 171/196 (87.2%)
# Similarity: 181/196 (92.3%)
# Gaps: 1/196 ( 0.5%)
# Score: 867.0
#
#
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BSNT_03450___ 1 MVNIIWVSLTVIGLVFAMCNGTLQDVNEAVFKGAKEAITISFGLMSVLVF 50
|||||||.|||||||||:.|||:|:||||||||:|||:||..||||||||
BL01880___spm 1 MVNIIWVGLTVIGLVFALFNGTVQEVNEAVFKGSKEAVTIVIGLMSVLVF 50
BSNT_03450___ 51 WLGLMKIAEQSGLLDIFSRMCRPFISKLFPDIPPDHPAMGYILSNLMANF 100
||||||||||||||:.|||:||||||||||:|||||||||||||||||||
BL01880___spm 51 WLGLMKIAEQSGLLEKFSRLCRPFISKLFPEIPPDHPAMGYILSNLMANF 100
BSNT_03450___ 101 FGLGNAATPLGIKAMEQMKKLNGNRSEASRSMITFLAVNTSCITLIPTTV 150
|||||||||||||||||||.||.||.|||||||||||||||.||||||||
BL01880___spm 101 FGLGNAATPLGIKAMEQMKALNRNRREASRSMITFLAVNTSSITLIPTTV 150
BSNT_03450___ 151 IAVRMAYSSKTPTDIVGPSILATLISGIGAIIIDRYFYYRRKKKGR 196
|||||.|.:|.|||||||:|||||||||.||.|||||||||||||
BL01880___spm 151 IAVRMTYDAKAPTDIVGPTILATLISGIFAIFIDRYFYYRRKKKG- 195
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