Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03450 and BL01880
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:26
# Commandline: needle
# -asequence dna-align/BSNT_03450___spmA.1.5803.seq
# -bsequence dna-align/BL01880___spmA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03450___spmA-BL01880___spmA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03450___spmA-BL01880___spmA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03450___spmA
# 2: BL01880___spmA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 593
# Identity: 451/593 (76.1%)
# Similarity: 451/593 (76.1%)
# Gaps: 7/593 ( 1.2%)
# Score: 1664.0
#
#
#=======================================
BSNT_03450___ 1 ATGGTCAATATAATTTGGGTCAGTTTAACCGTGATCGGACTCGTTTTTGC 50
||||||||||||||.||||||.|.|||||.||||||||.||.||.|||||
BL01880___spm 1 ATGGTCAATATAATCTGGGTCGGCTTAACGGTGATCGGTCTGGTGTTTGC 50
BSNT_03450___ 51 GATGTGCAACGGAACTCTGCAAGATGTAAATGAAGCCGTGTTTAAGGGTG 100
|.|.|.|||||||||..|.||.||.||.||||||||.||.|||||.||..
BL01880___spm 51 GCTTTTCAACGGAACGGTTCAGGAAGTTAATGAAGCTGTATTTAAAGGAT 100
BSNT_03450___ 101 CGAAAGAAGCGATTACGATT-TCATTTGGATTGATGAGCGTGCTTGTTTT 149
||||.|||||..|.|||||| |.| |.|||.||||||||||.||||||||
BL01880___spm 101 CGAAGGAAGCCGTCACGATTGTGA-TCGGACTGATGAGCGTCCTTGTTTT 149
BSNT_03450___ 150 CTGGCTTGGCTTAATGAAAATCGCCGAGCAGTCAGGTCTTTTGGATATTT 199
.|||||.||..|.|||||||||||.||.|||||.||.|||.|.||.|..|
BL01880___spm 150 TTGGCTGGGGCTGATGAAAATCGCTGAACAGTCCGGGCTTCTCGAAAAAT 199
BSNT_03450___ 200 TCAGCCGGATGTGCAGGCCTTTTATATCTAAACTGTTCCCTGATATACCG 249
|||||.||.|||||.||||.||.||.||.||.|||||.||.||.||.||.
BL01880___spm 200 TCAGCAGGCTGTGCCGGCCGTTCATTTCAAAGCTGTTTCCCGAGATCCCT 249
BSNT_03450___ 250 CCGGATCACCCGGCGATGGGCTATATTTTATCTAATCTTATGGCGAATTT 299
||||||||.|||||||||||.|||||||||||.|||.|.|||||.||.||
BL01880___spm 250 CCGGATCATCCGGCGATGGGATATATTTTATCCAATTTAATGGCCAACTT 299
BSNT_03450___ 300 CTTCGGCCTCGGAAATGCAGCAACTCCGCTTGGCATTAAAGCAATGGAAC 349
.|||||..|.||.||||||||.||.|||||.||.||||||||.|||||||
BL01880___spm 300 TTTCGGATTGGGCAATGCAGCGACACCGCTCGGTATTAAAGCGATGGAAC 349
BSNT_03450___ 350 AAATGAAAAAGCTGAACGGAAACCGATCGGAAGCAAGCCGGTCAATGATT 399
|.|||||...|||.|||.|.|||||...||||||.|||||.||||||||.
BL01880___spm 350 AGATGAAGGCGCTCAACCGGAACCGCAGGGAAGCGAGCCGCTCAATGATC 399
BSNT_03450___ 400 ACTTTTTTAGCTGTTAATACGTCCTGCATCACACTCATCCCGACAACGGT 449
||.|||.|.||.||.||||||||..||||.||..|.||.|||||.||.||
BL01880___spm 400 ACCTTTCTGGCGGTCAATACGTCAAGCATTACCTTGATTCCGACGACCGT 449
BSNT_03450___ 450 GATCGCTGTCCGAATGGCTTATTCCTCCAAA-ACGCCGACAGATATCGTC 498
.|||||.|||.|.|||.|.|| |..|.|||| .||||||||||.||||||
BL01880___spm 450 CATCGCGGTCAGGATGACATA-TGATGCAAAGGCGCCGACAGACATCGTC 498
BSNT_03450___ 499 GGGCCAAGCATTTTGGCAACGCTTATTTCCGGAATCGGTGCCATTATCAT 548
||.||.|.|||||||||.||..|.||.||.||.|||..|||.||..||||
BL01880___spm 499 GGTCCGACCATTTTGGCGACTTTAATATCGGGGATCTTTGCGATCTTCAT 548
BSNT_03450___ 549 TGATCGGTATTTTTATTACCGCCGCAAAAAGAAGGGAAGGTGA 591
.||.||.||.||||||||..|..|.|||||||||| |||||
BL01880___spm 549 CGACCGATACTTTTATTATAGAAGAAAAAAGAAGG---GGTGA 588
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