Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03134 and BL01874

See DNA alignment / Visit BSNT_03134 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:48
# Commandline: needle
#    -asequence pep-align/BSNT_03134___acpD.1.5803.seq
#    -bsequence pep-align/BL01874.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03134___acpD-BL01874.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03134___acpD-BL01874.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03134___acpD
# 2: BL01874
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 208
# Identity:     167/208 (80.3%)
# Similarity:   187/208 (89.9%)
# Gaps:           0/208 ( 0.0%)
# Score: 880.0
# 
#
#=======================================

BSNT_03134___      1 MSTVLFVKSSDRTAEEGVSTKLYEAFLAAYKENNPNDEVVELDLHKENLP     50
                     ||.|||||::||||||.||.|||||||.:||||:||||:|||||::||.|
BL01874            1 MSKVLFVKANDRTAEEAVSVKLYEAFLNSYKENHPNDEIVELDLYRENPP     50

BSNT_03134___     51 YLGRDMINGTFKAGQGMEMTEDEKKQAAIADKYLNQFVKADKVVFAFPLW    100
                     ||||:.||||||||:|||:.||||..||:||:||::||||||||||||||
BL01874           51 YLGRNAINGTFKAGKGMELNEDEKAAAAVADRYLDEFVKADKVVFAFPLW    100

BSNT_03134___    101 NFTVPAVLHTYVDYLSRAGVTFKYTQEGPVGLMGGKKVALLNARGGVYSE    150
                     ||.|||||||||||||||||||.||.|||.||||.|||||||||||.|||
BL01874          101 NFAVPAVLHTYVDYLSRAGVTFTYTPEGPKGLMGDKKVALLNARGGFYSE    150

BSNT_03134___    151 GPMAALEMSLNFMKTVLGFWGVQDLHTVVIEGHNAAPDQAQEIVEKGLQE    200
                     |||||:|||||:||||:||:|||||||||||||||.||.||:|:|.||.|
BL01874          151 GPMAAMEMSLNYMKTVMGFFGVQDLHTVVIEGHNAVPDDAQKIIENGLAE    200

BSNT_03134___    201 AKDLAAKF    208
                     ||.|||.|
BL01874          201 AKKLAASF    208


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