Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03134 and BL01874
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:48
# Commandline: needle
# -asequence dna-align/BSNT_03134___acpD.1.5803.seq
# -bsequence dna-align/BL01874.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03134___acpD-BL01874.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03134___acpD-BL01874.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03134___acpD
# 2: BL01874
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 639
# Identity: 464/639 (72.6%)
# Similarity: 464/639 (72.6%)
# Gaps: 24/639 ( 3.8%)
# Score: 1656.5
#
#
#=======================================
BSNT_03134___ 1 ATGTCTACAGTTTTATTTGTAAAATCAAGCGACCGTACAGCTGAAGAAGG 50
|||||||.|||.||.|||||.|||.|.|..|||||||||||||||||||.
BL01874 1 ATGTCTAAAGTATTGTTTGTTAAAGCTAATGACCGTACAGCTGAAGAAGC 50
BSNT_03134___ 51 CGTTTCAACTAAACTTTACGAAGC-TTTCTTAGCTGCTTATAAAGAAAAC 99
.||.||....||||||||.||||| |||||||.|.|| |||||||||||.
BL01874 51 TGTATCTGTAAAACTTTATGAAGCGTTTCTTAACAGC-TATAAAGAAAAT 99
BSNT_03134___ 100 AACCCTAATGATGAAGTGGTTGAATTAGATCTTCATAAGGAAAACCTTCC 149
.|.||.||.||||||.|.||.||..|.||.|||.|.|..|||||||..||
BL01874 100 CATCCAAACGATGAAATTGTAGAGCTTGACCTTTACAGAGAAAACCCGCC 149
BSNT_03134___ 150 TTACCTTGGCAGAGATATGATTAACGGAACATTTAAAGCAGGTCAAGGAA 199
.|||||.||||||.||...||||||||.||||||||||||||..||||.|
BL01874 150 GTACCTAGGCAGAAATGCCATTAACGGGACATTTAAAGCAGGAAAAGGCA 199
BSNT_03134___ 200 TGGAAATGACAGAAGATGAGAAAAAACAAGCAGCAATTGCTGACAAATAT 249
|||||.|||..||.|||| ||.||||.||....|||| ||.
BL01874 200 TGGAATTGAACGAGGATG------AAAAAGCTGCCGCCGCTG-----TAG 238
BSNT_03134___ 250 CTGA-----------ACCAGTTTGTAAAAGCTGACAAAGTTGTTTTCGCA 288
|.|| ||.|.||.||.|||||.||.||.||||||||.||.
BL01874 239 CGGATCGTTACTTAGACGAATTCGTCAAAGCCGATAAGGTTGTTTTTGCT 288
BSNT_03134___ 289 TTCCCGCTTTGGAACTTCACAGTGCCAGCAGTGCTTCATACTTATGTTGA 338
|||||..|.|||||||||.|.||.|||||.||.|||||.||||||||.||
BL01874 289 TTCCCATTGTGGAACTTCGCCGTTCCAGCTGTACTTCACACTTATGTGGA 338
BSNT_03134___ 339 TTATCTGTCTCGCGCAGGCGTTACATTCAAATACACACAAGAAGGACCAG 388
.||..||||.||||||||.||.||.||.|.||||||.|..||||||||..
BL01874 339 CTACTTGTCCCGCGCAGGAGTGACGTTTACATACACTCCTGAAGGACCTA 388
BSNT_03134___ 389 TCGGTTTAATGGGCGGCAAAAAAGTTGCGCTTCTTAACGCTCGCGGCGGT 438
..||..|.|||||.|..||.||.|||||.||..|.||.||..|.||.||.
BL01874 389 AAGGCCTGATGGGAGATAAGAAGGTTGCTCTGTTAAATGCAAGAGGAGGC 438
BSNT_03134___ 439 GTCTACTCAGAAGGACCAATGGCTGCACTTGAAATGTCATTAAACTTCAT 488
.||||.||.||||||||.|||||||||.|.||||||||.||.||||.|||
BL01874 439 TTCTATTCTGAAGGACCGATGGCTGCAATGGAAATGTCGTTGAACTACAT 488
BSNT_03134___ 489 GAAAACAGTTCTTGGTTTCTGGGGTGTTCAAGACTTGCACACAGTTGTCA 538
||||||.||..|.||.||||..|||||||||||||||||.||.|||||||
BL01874 489 GAAAACCGTCATGGGCTTCTTCGGTGTTCAAGACTTGCATACCGTTGTCA 538
BSNT_03134___ 539 TCGAAGGACATAACGCAGCACCTGATCAAGCGCAAGAAATCGTTGAAAAA 588
||||||||||.|||||.|..|||||..|.||.|||.||||..|||||||.
BL01874 539 TCGAAGGACACAACGCTGTTCCTGACGACGCTCAAAAAATTATTGAAAAC 588
BSNT_03134___ 589 GGTTTACAAGAAGCAAAAGATCTTGCTGCAAAATTCTAA 627
||.|||..||||||.|||.|.|||||.|||..|||.|||
BL01874 589 GGCTTAGCAGAAGCTAAAAAGCTTGCAGCATCATTTTAA 627
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