Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00917 and BL01870
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:28
# Commandline: needle
# -asequence pep-align/BSNT_00917___ydfA.1.5803.seq
# -bsequence pep-align/BL01870___ydfA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00917___ydfA-BL01870___ydfA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00917___ydfA-BL01870___ydfA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00917___ydfA
# 2: BL01870___ydfA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 435
# Identity: 364/435 (83.7%)
# Similarity: 400/435 (92.0%)
# Gaps: 4/435 ( 0.9%)
# Score: 1860.0
#
#
#=======================================
BSNT_00917___ 1 MTSMILAVFIFLLTLVLVIWQPKNLSIGWSACGGAVLALIAGVVNFHDVL 50
||: :||..||||||.||||||||||||||||||||||||||||||.|||
BL01870___ydf 1 MTT-VLATLIFLLTLTLVIWQPKNLSIGWSACGGAVLALIAGVVNFQDVL 49
BSNT_00917___ 51 TVTGIVWNATLAFVAIILISLILDNIGFFEWAALHMAKAAKGNGVRMFVY 100
.||||||||||||||||:||||||.|||||||||||||||||||:|||||
BL01870___ydf 50 DVTGIVWNATLAFVAIIIISLILDEIGFFEWAALHMAKAAKGNGIRMFVY 99
BSNT_00917___ 101 VSLLGAIVAALFANDGAALILTPIVLAMVRALHFNEKLVFPFIIASGFIA 150
|:||||:|||||||||||||||||||||||||:|.|||||||||||||||
BL01870___ydf 100 VTLLGAVVAALFANDGAALILTPIVLAMVRALNFQEKLVFPFIIASGFIA 149
BSNT_00917___ 151 DTTSLPLVVSNLVNIVSADYFHITFIDYASRMVVPYLFSLLASIIVLYLF 200
|||||||||||||||||||:|:|.||:||:||:||.||||:||||||:||
BL01870___ydf 150 DTTSLPLVVSNLVNIVSADFFNIGFIEYATRMIVPNLFSLIASIIVLFLF 199
BSNT_00917___ 201 FRKSIPKRYDLTEVKKPVEAIKDQNMFRLSWYILGLLLIGYFASEFFSIP 250
||||||:.||:|.||:|.|||:|:.:|||||.||.:||.|||.||.||||
BL01870___ydf 200 FRKSIPRHYDMTNVKQPAEAIRDRKIFRLSWLILAVLLAGYFISELFSIP 249
BSNT_00917___ 251 VSVVAGSIAIIFLIAAQKSPAVHTKKVVKEAPWAIVFFSIGMYVVVYGVR 300
||::||.||:||||.|:.||||.||||:|.||||||||||||||||||:|
BL01870___ydf 250 VSIIAGVIAVIFLITAKNSPAVQTKKVLKGAPWAIVFFSIGMYVVVYGLR 299
BSNT_00917___ 301 NAGLTDVLSDVIQAAADQGLFAGTIGMGFIAAILSSIMNNLPTVMIDALA 350
|||||||||.|||..:||||||||:|||||||||||:|||:|||||||||
BL01870___ydf 300 NAGLTDVLSQVIQTVSDQGLFAGTMGMGFIAAILSSLMNNMPTVMIDALA 349
BSNT_00917___ 351 IAGTDTHGMMREALIYANVIGSDLGPKITPIGSLATLLWLHVLSHKGMKI 400
|..|||||::||||||||||||||||||||||||||||||||||.||:||
BL01870___ydf 350 IQNTDTHGILREALIYANVIGSDLGPKITPIGSLATLLWLHVLSLKGVKI 399
BSNT_00917___ 401 SWGTYFKTGIILTIPTLLITLVGLYIWLLIIHSCF 435
|||||||||:|||||||.|||.|||:||||||
BL01870___ydf 400 SWGTYFKTGVILTIPTLFITLAGLYVWLLIIH--- 431
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