Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03024 and BL01866
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:43
# Commandline: needle
# -asequence pep-align/BSNT_03024___yngK.1.5803.seq
# -bsequence pep-align/BL01866___yngK.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03024___yngK-BL01866___yngK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03024___yngK-BL01866___yngK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03024___yngK
# 2: BL01866___yngK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 513
# Identity: 301/513 (58.7%)
# Similarity: 335/513 (65.3%)
# Gaps: 121/513 (23.6%)
# Score: 1681.0
#
#
#=======================================
BSNT_03024___ 1 MKVCQKSIVRFLVSLIIGTFVISVPFMANAQS---DRELRAVWIASVLNI 47
|....: .:|.||||||:|.||
BL01866___yng 1 --------------------------MKEKSAGCETKEFRAVWIATVTNI 24
BSNT_03024___ 48 DWPSKKGLSVKEQKQEYIKLLDDVQKMGMNAVIVQIKPTADAFYPSAYGP 97
||||||||:::|||.||:||||||..||||||:|||||.|||||||||||
BL01866___yng 25 DWPSKKGLTIEEQKTEYVKLLDDVTAMGMNAVVVQIKPAADAFYPSAYGP 74
BSNT_03024___ 98 WSEYLTGVQGKDPGYDPLAFMIEETHKRNLEFHAWFNPYRITMNHTDLNK 147
|||||||:||||||||||||::||||:|.||||||||||||||||||||:
BL01866___yng 75 WSEYLTGIQGKDPGYDPLAFLLEETHRRKLEFHAWFNPYRITMNHTDLNR 124
BSNT_03024___ 148 LSESHPARKHPDWVAAYGNQLYYHPGIPETRDFIVKGIEEVVKHYDIDAV 197
||:.||||.|||||.|||.||||:|||||.::|||:||.||||:|.:|||
BL01866___yng 125 LSQDHPARTHPDWVVAYGRQLYYNPGIPEAQEFIVQGIAEVVKNYPVDAV 174
BSNT_03024___ 198 HMDDYFYPYKIAGQEFPDQAQYEQYGKGAFSNIDDWRRDNVNQLVKQINQ 247
|||||||||||||.||||.:.||||||..||||:|||||||||||||||.
BL01866___yng 175 HMDDYFYPYKIAGVEFPDLSTYEQYGKDRFSNIEDWRRDNVNQLVKQIND 224
BSNT_03024___ 248 TIKAEKPYVKFGISPFGVWRNAADDPTGSNTKAGVRNYDDLYADTRHWIQ 297
.:|.|:..|||||||||||||.|||||||||.||:.||||||||||.||:
BL01866___yng 225 AVKKERASVKFGISPFGVWRNIADDPTGSNTAAGMTNYDDLYADTREWIR 274
BSNT_03024___ 298 EGDIDYIAPQIYWSIGFNAAAYDVLADWWSNEVKNRPVHLYIGQAAYKIN 347
:|.||||||||||||||..|:||:|.|||.|||.:|||||||||||||||
BL01866___yng 275 QGYIDYIAPQIYWSIGFAPASYDILVDWWKNEVSHRPVHLYIGQAAYKIN 324
BSNT_03024___ 348 NNFDPPWSDPEEYVRQITLNRQLELVKGSMHFSLKDLNKNPLGIKDRLIA 397
.|.||.|||||||.|||.|||... |.||:||||||||:||||||||||.
BL01866___yng 325 QNSDPAWSDPEEYPRQIALNRASN-VMGSIHFSLKDLNRNPLGIKDRLIQ 373
BSNT_03024___ 398 DLYSKPALVPQMPWLDNTAPKKPKLTKVTEDKNGNLLQIKDHPSNQKTKE 447
|||.|||.||.||||.:...:.
BL01866___yng 374 DLYKKPAAVPDMPWLGSVNSEN---------------------------- 395
BSNT_03024___ 448 TAYYAIYRAEGKKQNTLLATQRKTHEQQTFLDNTADPNKKYTYYVTSADR 497
BL01866___yng 395 -------------------------------------------------- 395
BSNT_03024___ 498 LHNESKASKRTTK 510
BL01866___yng 395 ------------- 395
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