Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00684 and BL01857
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:19
# Commandline: needle
# -asequence pep-align/BSNT_00684___gabR.1.5803.seq
# -bsequence pep-align/BL01857___gabR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00684___gabR-BL01857___gabR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00684___gabR-BL01857___gabR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00684___gabR
# 2: BL01857___gabR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 482
# Identity: 293/482 (60.8%)
# Similarity: 364/482 (75.5%)
# Gaps: 9/482 ( 1.9%)
# Score: 1511.0
#
#
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BSNT_00684___ 1 MDITITLDRSERADYIYQQIYQKLKKEILSRNLLPHSKVPSKRELAENLK 50
.|||.:|||:.|:|||.||||::|:||.||||||..|:||||||||.|.
BL01857___gab 1 -MITIPIDRSKGAEYIYHQIYQRIKEEIFSRNLLPGKKLPSKRELAETLN 49
BSNT_00684___ 51 VSVNSVNSAYQQLLAEGYLYAIERKGFFVEELDMFSAEEHP-PFALPDDL 99
||:||||:||||||||||||:.||||||||:::.|.|..|| |..|..:|
BL01857___gab 50 VSINSVNAAYQQLLAEGYLYSRERKGFFVEQIETFHASRHPGPLQLEKEL 99
BSNT_00684___ 100 KEIHIDQSDWISFSHMSSDTDHFPIKSWFRCEQKAASRSYRRLGDMSHPQ 149
.|....:..||||||||.||.|||.|:|.||||||.|.....||:|:|||
BL01857___gab 100 VEEPESKDGWISFSHMSVDTAHFPFKTWLRCEQKAVSSHVDELGEMTHPQ 149
BSNT_00684___ 150 GIYEVRAAITRLISLTRGVKCRPEQMIIGAGTQVLMQLLTELLPKEAVYA 199
|:||||..|.|.|:|||||||.|||::|.||||.|:..|.:|||..||||
BL01857___gab 150 GVYEVRQTIARFIALTRGVKCLPEQIVISAGTQSLIHTLQDLLPASAVYA 199
BSNT_00684___ 200 MEEPGYRRMYQLLKNAGKQVKTIMLDEKGMSIAEITRQQPDVLVTTPSHQ 249
||||||.|:|:||||.||:|.||.||.|||.|:||.|..||||..|||||
BL01857___gab 200 MEEPGYSRIYRLLKNEGKEVATIQLDHKGMRISEIHRLNPDVLFVTPSHQ 249
BSNT_00684___ 250 FPSGTIMPVSRRIQLLNWAAEEPRRYIIEDDYDSEFTYDVDSIPALQSLD 299
||:|.|||||||||||||.::...|||:||||||||.|..|:||||||||
BL01857___gab 250 FPTGIIMPVSRRIQLLNWVSDGANRYIVEDDYDSEFKYGSDTIPALQSLD 299
BSNT_00684___ 300 RFQNVIYMGTFSKSLLPGLRISYMVLPPELLRAYKQR-GYDLQTCSSLTQ 348
|.:.|||:|||||||||||||||||||.:||:.|::| .:.:|:.|.|||
BL01857___gab 300 RSEKVIYIGTFSKSLLPGLRISYMVLPQKLLKRYRKRHHFSIQSSSVLTQ 349
BSNT_00684___ 349 LTLQEFIESGEYQKHIKKMKQHYKEKRERLITALEAEFSGEVTVKGANAG 398
|.|||.|||||||||||||.|.|::||.|||.:|...|:|.|.:||.:||
BL01857___gab 350 LALQELIESGEYQKHIKKMNQIYEKKRTRLIGSLVKHFNGRVKIKGESAG 399
BSNT_00684___ 399 LHFVTEFDTRRTEQDILSHAAGLQLEIFGMSRFNL-KENKRQTGRPALII 447
||||.:|:|.|:|:::|..|...::|::|||||.| ||..:..|..:|::
BL01857___gab 400 LHFVADFETDRSEEEVLLRAKERRVEVYGMSRFTLKKEQTKHEGTVSLVL 449
BSNT_00684___ 448 GFARLKEEDVQAGVQRLFKAVYGHKKIPVTGD 479
|||::..:.:..|..:|::||.|.:|:
BL01857___gab 450 GFAKIAADQIDEGTAKLYEAVCGDEKL----- 476
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