Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_00680 and BL01853

See DNA alignment / Visit BSNT_00680 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:18
# Commandline: needle
#    -asequence pep-align/BSNT_00680___ycnC.1.5803.seq
#    -bsequence pep-align/BL01853___ycnC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00680___ycnC-BL01853___ycnC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00680___ycnC-BL01853___ycnC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00680___ycnC
# 2: BL01853___ycnC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 295
# Identity:     130/295 (44.1%)
# Similarity:   191/295 (64.7%)
# Gaps:           3/295 ( 1.0%)
# Score: 628.5
# 
#
#=======================================

BSNT_00680___      1 MLDKKTDILLAARKLFSEKDFTSVSMQAIAEECKMSKASIYKLFQSKEDL     50
                     |.:||..:|.||:|||::|.:.:|:|||||||||||||||||||||||||
BL01853___ycn      1 MNEKKAAVLRAAKKLFAQKGYHNVAMQAIAEECKMSKASIYKLFQSKEDL     50

BSNT_00680___     51 LLELLSFNQKQMVAAASRLQENTALTPEERLTQKVKMELEGFRRNQQFFN    100
                     ||.|:.|.:.:|:..::.:...|:|||:||..:|:.:|:..||.|:||.|
BL01853___ycn     51 LLALIKFRKHEMLNKSAVINTETSLTPKERFAKKIALEITEFRENRQFIN    100

BSNT_00680___    101 MLTYGNPKLHNDRVKQHIHQTRSTIICWHRDSLIQAYGETILPFVWDLVI    150
                     .::...........|:|:.:|:|.||.||:||:||||||.:.||:||:||
BL01853___ycn    101 FISNEGSSPDTAVFKKHLKETKSMIISWHKDSIIQAYGEEVEPFIWDIVI    150

BSNT_00680___    151 ILHGMMREFLMLIKIEEKPLELDPIAEFIISTLNQIIKNR--ETRQSLLP    198
                     |.||:|||||.|:...:...::..|..||:|.|:..|:.:  |.::|.|.
BL01853___ycn    151 IFHGLMREFLFLVGTGKAQPDVKTIPPFIMSVLDLFIEKKLNEDQKSSLN    200

BSNT_00680___    199 PEAIELYIHSASSYKPKDKSVLLSESLKELHKGISSLSAADYDVDELTSA    248
                     .:.|..|.:.:|.:.|..|..||.:.|::|...||||...|..|.||.||
BL01853___ycn    201 EDIIASYSNFSSCWAPPKKEELLEDLLQKLKTKISSLPQDDVSVTELLSA    250

BSNT_00680___    249 AAMLEEEAKKEEPRAFLLKSLIGYLEQTSVLTQPVSMLKTLLIT-    292
                     |.:|.||....|||.:|:|:|:.||.:...:...||.::|:.|. 
BL01853___ycn    251 ADLLSEELFANEPRTYLIKALLDYLGKIEAIQYDVSQIQTISIKE    295


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.