Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_00380 and BL01843

See DNA alignment / Visit BSNT_00380 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:02
# Commandline: needle
#    -asequence pep-align/BSNT_00380___ybfA.1.5803.seq
#    -bsequence pep-align/BL01843___ybfA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00380___ybfA-BL01843___ybfA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00380___ybfA-BL01843___ybfA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00380___ybfA
# 2: BL01843___ybfA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 309
# Identity:     212/309 (68.6%)
# Similarity:   260/309 (84.1%)
# Gaps:           4/309 ( 1.3%)
# Score: 1144.0
# 
#
#=======================================

BSNT_00380___      1 MGIDLKTRESSVGLKFRKFNRFYTNVLGFLNEHIYDSPFSLTETRILFEI     50
                         :.....|..|||||||||||||||||||||||||||||||||||||
BL01843___ybf      1 ----MAEINHSTTLKFRKFNRFYTNVLGFLNEHIYDSPFSLTETRILFEI     46

BSNT_00380___     51 YNTPNCTAKALQDKLGLDRGYVSRIVKQFEIEDLIYKQRSKDDARHHYIF    100
                     :||.:||||.:||.|||||||||||:|:||.|:::||:||::|:|:|||:
BL01843___ybf     47 HNTADCTAKLIQDTLGLDRGYVSRILKRFEKENMVYKKRSEEDSRNHYIY     96

BSNT_00380___    101 VTETGKTIYKKLEEKANEQVELMLKEINQKEQQKLSEAMAEIEEILSQSL    150
                     :|..|::||||||.|||:|:|.|||.|:.:.|:||:|||..||.|||:.|
BL01843___ybf     97 LTSFGESIYKKLEAKANQQIENMLKHIDGRHQEKLTEAMNTIECILSEHL    146

BSNT_00380___    151 SARTSEISIRDYFLSEDIQLLIEKQRQFYAEAHGWDDTFLAYLQETFDAD    200
                     ....|.:|||||::|:||:|:|||||.||||.|||||:||.||.|||||:
BL01843___ybf    147 PPEKSAVSIRDYYISDDIKLMIEKQRAFYAETHGWDDSFLDYLHETFDAE    196

BSNT_00380___    201 IEKIWIAESGGKFAGSVGLVKHDEKTVQLRWFLVDADFRGRGLGTQLLEH    250
                     |||||||||.|:|||.||||||..:|||||||||||.||.:|:||:||||
BL01843___ybf    197 IEKIWIAESAGRFAGCVGLVKHPGRTVQLRWFLVDAAFRHQGVGTRLLEH    246

BSNT_00380___    251 LVAYCQDMKFDRIFLWTVSTMAEARPLYKKFGFRISEVKQEAPLWGQQLT    300
                     |:.||::.:::|||||||||||||||||:|||||::|||.|..||||:|.
BL01843___ybf    247 LIDYCKENQYERIFLWTVSTMAEARPLYEKFGFRLTEVKDETLLWGQRLR    296

BSNT_00380___    301 EERWDLELS    309
                     |||||.||.
BL01843___ybf    297 EERWDAELG    305


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.