Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00643 and BL01831

See DNA alignment / Visit BSNT_00643 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:16
# Commandline: needle
#    -asequence pep-align/BSNT_00643___yclA.1.5803.seq
#    -bsequence pep-align/BL01831___yclA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00643___yclA-BL01831___yclA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00643___yclA-BL01831___yclA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00643___yclA
# 2: BL01831___yclA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 290
# Identity:     189/290 (65.2%)
# Similarity:   236/290 (81.4%)
# Gaps:           0/290 ( 0.0%)
# Score: 1008.0
# 
#
#=======================================

BSNT_00643___      1 MDIRQPRYFITIAQEQKITSAAKKLHMAQPPLSRQLKQLEDELGVVLFDR     50
                     |||||.:||:|||:|.|||:|||:||:|||||||||||:|:|||||||||
BL01831___ycl      1 MDIRQLKYFVTIAREGKITTAAKRLHIAQPPLSRQLKQMEEELGVVLFDR     50

BSNT_00643___     51 NKKKQMTLTYEGAVFLKRAKEILHRFEDAVIEVQELKEEVAGTLAVGSTI    100
                     ||||.:||||||.|||||||||||:.||:::||:||:|||.|||||||||
BL01831___ycl     51 NKKKNLTLTYEGEVFLKRAKEILHKLEDSILEVRELREEVNGTLAVGSTI    100

BSNT_00643___    101 YCAALMLEKVTQIKERYPHLTFNIWENEPATLLELLESRQIDAAVTTTLI    150
                     |||||:|.||::|::.||:|.|||||.||:.|.|||||||||||||||.|
BL01831___ycl    101 YCAALLLSKVSKIRDMYPNLMFNIWEGEPSRLSELLESRQIDAAVTTTPI    150

BSNT_00643___    151 KSDTVQFKQLDDIPCVLVLSDEAGYPCGDTIKMEDIPSFPLILLRPVNGK    200
                     .|...:.|.|.::||.|||.....|.......|::|...|||||||.:||
BL01831___ycl    151 HSKNTESKSLPEVPCKLVLPGNQSYGLKGEAGMKEIAGLPLILLRPSHGK    200

BSNT_00643___    201 GVYNQVMNEFHRLNLEPRIVCECHDSATLLSLVSSGFGASILPVTMIPVH    250
                     |:|::|::.|....||||:|||||||.||||||:|||||:|||::|:|.|
BL01831___ycl    201 GIYDEVVHHFQSSGLEPRVVCECHDSTTLLSLVTSGFGATILPLSMLPAH    250

BSNT_00643___    251 MRNHVHTVHIENNPFIMTPAVMWRTDSYLPKPAQQFLDLF    290
                     ...||.|:.|:|||||:.|:|:||..|:||||.::||.||
BL01831___ycl    251 FARHVQTLEIQNNPFILQPSVVWRAGSFLPKPVREFLALF    290


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