Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06192 and BL01830
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:09
# Commandline: needle
# -asequence pep-align/BSNT_06192___rocR.1.5803.seq
# -bsequence pep-align/BL01830___rocR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06192___rocR-BL01830___rocR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06192___rocR-BL01830___rocR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06192___rocR
# 2: BL01830___rocR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 473
# Identity: 320/473 (67.7%)
# Similarity: 385/473 (81.4%)
# Gaps: 15/473 ( 3.2%)
# Score: 1637.0
#
#
#=======================================
BSNT_06192___ 1 MVKDSEFLTLVFQSILDEIDVGLHVVDEHGNTIVYNNKMMQIEDMEKHDV 50
|:||.:||.|:||.|:||||:|||||||:|.::|||.||.|||.|:..||
BL01830___roc 1 MLKDYDFLKLIFQGIIDEIDIGLHVVDENGTSVVYNKKMSQIEGMDVGDV 50
BSNT_06192___ 51 LNKNLMDVFMFSKQQDSTLVQALQEGKTIKNVKQSYFNNKGQEITTINHT 100
|.||::|||.|:.|.||||:|||..|||.|||||:|||||||||||:|||
BL01830___roc 51 LGKNVLDVFTFASQHDSTLLQALHHGKTNKNVKQTYFNNKGQEITTVNHT 100
BSNT_06192___ 101 YPIVQDGKIRGAVEIAKDVTKLERLIRENMNKKGSTTYTFDSILGTSPAI 150
:||:::|..:||||||||||||||||||||||..||.|||||::|.|||.
BL01830___roc 101 FPIMENGNTKGAVEIAKDVTKLERLIRENMNKTESTKYTFDSLIGVSPAF 150
BSNT_06192___ 151 QDVIENAKRATRTSSSVLLAGETGTGKELFAQSIHNGSDRSGGPFISQNC 200
::|||:||||||||||:|:.|:||||||||||||||||.||.||||||||
BL01830___roc 151 KEVIEHAKRATRTSSSILIVGDTGTGKELFAQSIHNGSQRSTGPFISQNC 200
BSNT_06192___ 201 AALPDSLVESILFGTKKGAFTGAVDQPGLFEQAHGGTLLLDEINSLNLSL 250
||||:||||.:||||.|||||||||:|||||||.||||||||||||:..|
BL01830___roc 201 AALPESLVEGLLFGTVKGAFTGAVDRPGLFEQADGGTLLLDEINSLDFRL 250
BSNT_06192___ 251 QAKLLRALQERKIRRIGSTKDTPIDVRIIATMNEDPIDAIAGERMRKDLY 300
|||||||:||:.|||||::|||||||||||||||||:||::|:|:|||||
BL01830___roc 251 QAKLLRAIQEKTIRRIGASKDTPIDVRIIATMNEDPVDAVSGQRLRKDLY 300
BSNT_06192___ 301 YRLSVVTLIIPPLRERKEDILLLASEFIQKNNHLFQMNVEHISDDVKQFF 350
||||||||.||||::|||||:.|...||.|.|.||||.|:...::|::|.
BL01830___roc 301 YRLSVVTLFIPPLKDRKEDIMPLTQHFIDKYNALFQMEVKGFEEEVRRFL 350
BSNT_06192___ 351 LSYDWPGNIRELEHMIEGAMNFMTDEQTITASHLPYQYRMKIKPA---DI 397
||||||||:|||||:||||||.|:.|..|..:|||.||| .||| .:
BL01830___roc 351 LSYDWPGNVRELEHLIEGAMNLMSYEDKIELTHLPLQYR--TKPAAKEQL 398
BSNT_06192___ 398 PEPETPRHQP-----AADLKEKMESFEKYVIENVLRKHGHNISKAAQELG 442
|:.......| ||.|||::|:.|||.|:..::|..:|:|:||:.||
BL01830___roc 399 PQQGYDLFAPLPSASAAPLKEQIENAEKYYIQKTVKKCNYNVSQAARVLG 448
BSNT_06192___ 443 ISRQSLQYRLKK----FSHSSNE 461
|||||||||||| |...|.
BL01830___roc 449 ISRQSLQYRLKKWKIRFDQESE- 470
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