Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00610 and BL01820

See DNA alignment / Visit BSNT_00610 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:14
# Commandline: needle
#    -asequence pep-align/BSNT_00610___nucA.1.5803.seq
#    -bsequence pep-align/BL01820___nucA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00610___nucA-BL01820___nucA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00610___nucA-BL01820___nucA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00610___nucA
# 2: BL01820___nucA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 152
# Identity:      96/152 (63.2%)
# Similarity:   119/152 (78.3%)
# Gaps:           7/152 ( 4.6%)
# Score: 542.0
# 
#
#=======================================

BSNT_00610___      1 MNITTDIIKTILLVIVIIAAAAVGLIKGDFFSADQKTS---QTKEYDETI     47
                         .|.||::|:.::.:|...:|::.||||:::.:.|   ....|||.:
BL01820___nuc      1 ----MDKIKSLLITLLAVAVVIIGIVSGDFFTSEHQPSGRQNGSNYDEVL     46

BSNT_00610___     48 AFPSDRYPETAKHIKDAINEGHSEVCTIDRDGAEERREQSLKDVPSKKGY     97
                     .|||||||||..||:.||.:||||:||||||||.|||:.||||||||.||
BL01820___nuc     47 IFPSDRYPETGAHIRKAIKKGHSEICTIDRDGAAERRKDSLKDVPSKSGY     96

BSNT_00610___     98 DRDEWPMAMCKEGGEGASVEYISPADNRGAGSWVGHQLTDYPDGTKVLFT    147
                     ||||||||||:|||.|||||||||:||||||||||:|::||||||||||.
BL01820___nuc     97 DRDEWPMAMCEEGGTGASVEYISPSDNRGAGSWVGNQVSDYPDGTKVLFK    146

BSNT_00610___    148 IQ    149
                     |.
BL01820___nuc    147 IN    148


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