Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00597 and BL01817
See
DNA alignment /
Visit
BSNT_00597 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:13
# Commandline: needle
# -asequence pep-align/BSNT_00597___yckA.1.5803.seq
# -bsequence pep-align/BL01817___yckA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00597___yckA-BL01817___yckA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00597___yckA-BL01817___yckA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00597___yckA
# 2: BL01817___yckA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 228
# Identity: 168/228 (73.7%)
# Similarity: 196/228 (86.0%)
# Gaps: 3/228 ( 1.3%)
# Score: 881.0
#
#
#=======================================
BSNT_00597___ 1 MINSIQWEYIFNTKLVIESFPYVIKGIGYTLLISFVSMFAGTVIGLFISL 50
:.|||||||||.:|..:|||||::||..||.|||.|||||.::|.||:|
BL01817___yck 1 -MGSIQWEYIFNAELAAKSFPYVMQGIWNTLFISFASMFAGLILGFFIAL 49
BSNT_00597___ 51 ARMSKLALLRWPAKLYISFMRGVPILVILFILYFGFPYISIQFSAVTAAL 100
.|||.||||||||::||||||||||||||||||||||||.|||:|:.|||
BL01817___yck 50 GRMSGLALLRWPARIYISFMRGVPILVILFILYFGFPYIGIQFTALAAAL 99
BSNT_00597___ 101 IGFSLNSAAYIAEINRSAISSVEKGQWEAASSLGLSYWQTMRGIILPQSI 150
||||:|||||||||.|||:|||::|||:||.|:|.|||||||.:|:|||:
BL01817___yck 100 IGFSINSAAYIAEIIRSALSSVDRGQWDAAKSVGFSYWQTMRHVIVPQSV 149
BSNT_00597___ 151 HIALPPLANVLLDLIKASSLAAMITVPELLQHAKIIGGREFDYMTMYILT 200
.|||||||||:|||:||||||||||||||.|.|||:|||||||||||||.
BL01817___yck 150 RIALPPLANVMLDLVKASSLAAMITVPELFQQAKIVGGREFDYMTMYILV 199
BSNT_00597___ 201 ALIYWAICSIAAVFQNILEKKYAHYV-- 226
|||||||||..|:.|:.|||:...|:
BL01817___yck 200 ALIYWAICSGIALLQDFLEKRTEVYIKK 227
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.