Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00574 and BL01815

See DNA alignment / Visit BSNT_00574 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:11
# Commandline: needle
#    -asequence pep-align/BSNT_00574___ycgR.1.5803.seq
#    -bsequence pep-align/BL01815___ycgR.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00574___ycgR-BL01815___ycgR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00574___ycgR-BL01815___ycgR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00574___ycgR
# 2: BL01815___ycgR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 302
# Identity:     249/302 (82.5%)
# Similarity:   270/302 (89.4%)
# Gaps:           9/302 ( 3.0%)
# Score: 1248.5
# 
#
#=======================================

BSNT_00574___      1 MSGGFIVTAQSSFLQLNSIFISILIEAIPFILIGVILSGIIQMFVSEEMI     50
                            .|..|||||||||||||||||||:||||.:||:|||||:|||:
BL01815___ycg      1 -------MASQSFLQLNSIFISILIEAIPFVLIGVFISGLIQMFVTEEMM     43

BSNT_00574___     51 ARIMPKNRFLAVLFGALAGVLFPACECGIIPITRRLLLKGVPLHAGVAFM    100
                     |:|:|||||||||.|..||||||||||||:||.||||||||||||.||||
BL01815___ycg     44 AKIIPKNRFLAVLSGTFAGVLFPACECGIVPIARRLLLKGVPLHAAVAFM     93

BSNT_00574___    101 LTAPIINPIVLFSTYIAFGNRWSVVFYRGGLALAVSLIIGVILSYQFKDN    150
                     ||||||||||||||:|||||:|.|||||||||:|||||.|:|:|||||.|
BL01815___ycg     94 LTAPIINPIVLFSTFIAFGNKWDVVFYRGGLAIAVSLIAGLIISYQFKGN    143

BSNT_00574___    151 QLLKPDEPGHHHHHH--GTLLQKLGGTLRHAIDEFFSVGKYLIIGAFIAA    198
                     ||::....|||||.|  .:.|||||||||||:|||||||||||||||:||
BL01815___ycg    144 QLIENGTHGHHHHVHESQSFLQKLGGTLRHAVDEFFSVGKYLIIGAFVAA    193

BSNT_00574___    199 AMQTYVKTSTLLAIGQNDVSSSLVMMGLAFVLSLCSEVDAFIASSFSSTF    248
                     |||||:||||||||||||||||||||||:|||||||||||||||||||||
BL01815___ycg    194 AMQTYIKTSTLLAIGQNDVSSSLVMMGLSFVLSLCSEVDAFIASSFSSTF    243

BSNT_00574___    249 SLGSLIAFLVFGAMVDIKNLLMMLAAFKKRFVFLLITYIVVIVLAGSLLV    298
                     ||||||||||||||||||||||||..|||||||:||.||.||||||||||
BL01815___ycg    244 SLGSLIAFLVFGAMVDIKNLLMMLGIFKKRFVFVLIPYIAVIVLAGSLLV    293

BSNT_00574___    299 KG    300
                     ||
BL01815___ycg    294 KG    295


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