Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00573 and BL01814

See DNA alignment / Visit BSNT_00573 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:11
# Commandline: needle
#    -asequence pep-align/BSNT_00573___ycgQ.1.5803.seq
#    -bsequence pep-align/BL01814___ycgQ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00573___ycgQ-BL01814___ycgQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00573___ycgQ-BL01814___ycgQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00573___ycgQ
# 2: BL01814___ycgQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 285
# Identity:     202/285 (70.9%)
# Similarity:   241/285 (84.6%)
# Gaps:           4/285 ( 1.4%)
# Score: 1120.0
# 
#
#=======================================

BSNT_00573___      1 MFRLLVLMGFTFFFYHLHASGNLTKYINMKYAYLSFIAIFLLAILTAVQA     50
                     |||..:||.|||||:||||||||||||||||||||:|||.|||||||||.
BL01814___ycg      1 MFRTFILMLFTFFFFHLHASGNLTKYINMKYAYLSYIAIILLAILTAVQF     50

BSNT_00573___     51 YLFIKSPEKSGHHHDHDCGCSHDHEHDHEQNKPFYQRYLIYVVFLFPLVS    100
                     |:::||.::.|  .:|:|||.||  ||||::|||.||..||.||.|||.:
BL01814___ycg     51 YIYMKSSDEKG--CNHECGCGHD--HDHEKDKPFLQRMFIYFVFFFPLCT     96

BSNT_00573___    101 GIFFPIATLDSSIVKTKGFSFKAMESGDHYSQTQYLRPDASLYYAQDSYD    150
                     |:|.|.|||||:|||:|||||||:|..:||:||||||||.|:||.||.||
BL01814___ycg     97 GLFLPAATLDSNIVKSKGFSFKAIEQPEHYAQTQYLRPDTSIYYGQDGYD    146

BSNT_00573___    151 KQMKQLFNKYSSKKEISLTDDDFLKGMETIYNYPGEFLGRTIEFHGFAYK    200
                     :.|.:...||..|:.|:|.||||||||||||:||||||.||:||.|||:|
BL01814___ycg    147 ELMNKALKKYKEKQHITLKDDDFLKGMETIYHYPGEFLDRTLEFDGFAFK    196

BSNT_00573___    201 GNAINKNQLFVLRFGIIHCIADSGVYGMLVEFPKDMDIKDDEWIHIKGTL    250
                     |.||:..||||||||||||||||||||||||||::||||||:|:|:||||
BL01814___ycg    197 GEAISDKQLFVLRFGIIHCIADSGVYGMLVEFPENMDIKDDQWLHVKGTL    246

BSNT_00573___    251 ASEYYQPFKSTLPVVKVTDWNTIKKPDDPYVYRGF    285
                     :||||||||||:||:||.||:.||:|.||||||.:
BL01814___ycg    247 SSEYYQPFKSTIPVLKVKDWSAIKEPKDPYVYRTY    281


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