Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00404 and BL01804

See DNA alignment / Visit BSNT_00404 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:03
# Commandline: needle
#    -asequence pep-align/BSNT_00404___mpr.1.5803.seq
#    -bsequence pep-align/BL01804___blaSE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00404___mpr-BL01804___blaSE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00404___mpr-BL01804___blaSE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00404___mpr
# 2: BL01804___blaSE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 347
# Identity:     137/347 (39.5%)
# Similarity:   192/347 (55.3%)
# Gaps:          65/347 (18.7%)
# Score: 632.5
# 
#
#=======================================

BSNT_00404___      1 MKLVPRFRKQWFAYLTVLCLALAAAVSFGV---------------PAKAA     35
                                        :....:|..|:               ||:||
BL01804___bla      1 -------------------MVSKKSVKRGLITGLIGISIYSLGMHPAQAA     31

BSNT_00404___     36 ENPQTSVSNTGK---EGDATKNQTSKAEQ---VSAPYEGIGKTSKSLYGG     79
                     .:|.|.||:...   |...|.:...|::|   .|..:.|.||.:::    
BL01804___bla     32 PSPHTPVSSDPSYKAETSVTYDPNIKSDQYGLYSKAFTGTGKVNET----     77

BSNT_00404___     80 QTELEKNIQTLQP---SSIIGTDERTRISSTTSFPYRATVQLSIKYPNTS    126
                     :.:.||......|   .|:||:|:|||:::||::||||.|.:|      |
BL01804___bla     78 KEKAEKKSPAKAPYSIKSVIGSDDRTRVTNTTAYPYRAIVHIS------S    121

BSNT_00404___    127 STYGCTGFLINPNTVVTAGHCVYSQDHG-WASTITAAPGRNGSSYPYGTY    175
                     |...|||::|.|.||.|||||:|....| :|.|.|.:|||||:|||||:.
BL01804___bla    122 SIGSCTGWMIGPKTVATAGHCIYDTSSGSFAGTATVSPGRNGTSYPYGSV    171

BSNT_00404___    176 SGTMFYSVKGWTESKDTNYDYGAIKLNGSPGNTVGWYGYRTTNSSSPVGL    225
                     ..|.::...|| .|.:||||||||:|:...|||||::||..| :||.||.
BL01804___bla    172 KSTRYFIPSGW-RSGNTNYDYGAIELSEPIGNTVGYFGYSYT-TSSLVGT    219

BSNT_00404___    226 SSSVTGFPCDKTFGTMWSDTKPIRSAETYKLTYTTDTYGCQSGSPVYRNY    275
                     :.:::|:|.|||.||.|..:.||..:|||||.|..||||.||||||:...
BL01804___bla    220 TVTISGYPGDKTAGTQWQHSGPIAISETYKLQYAMDTYGGQSGSPVFEQS    269

BSNT_00404___    276 SD----TGQTAIAIHTN---GGSSYNLGTRVTNDVFNNIQYWANQ--    313
                     |.    :|..::|:|||   ||||||.|||:|.:||:|:..|.|.  
BL01804___bla    270 SSRTNCSGPCSLAVHTNGVYGGSSYNRGTRITKEVFDNLTNWKNSAQ    316


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