Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04188 and BL01799
See
DNA alignment /
Visit
BSNT_04188 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:16
# Commandline: needle
# -asequence pep-align/BSNT_04188___ysfC.1.5803.seq
# -bsequence pep-align/BL01799___ysfC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04188___ysfC-BL01799___ysfC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04188___ysfC-BL01799___ysfC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04188___ysfC
# 2: BL01799___ysfC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 470
# Identity: 379/470 (80.6%)
# Similarity: 421/470 (89.6%)
# Gaps: 0/470 ( 0.0%)
# Score: 1962.0
#
#
#=======================================
BSNT_04188___ 1 MITKDVKEQLIRVSGPENFDDSNAGRLVYSYDATPQYQSMPDAVIAPRNT 50
||:..|:.:||.:.|..|:|||||||||||||||||:|||||||||||:.
BL01799___ysf 1 MISSQVRSKLIEIVGSANYDDSNAGRLVYSYDATPQFQSMPDAVIAPRSK 50
BSNT_04188___ 51 EEVSRILTICSEHRVPIVPRGSGTNLCGGTCPTEGGLVLLFKHMNQILEI 100
||||||:.||:.||:||||||||||||.||||||||:|||||||||||||
BL01799___ysf 51 EEVSRIVKICNTHRIPIVPRGSGTNLCAGTCPTEGGIVLLFKHMNQILEI 100
BSNT_04188___ 101 DEENLTATVQPGVITLDMIRAVESKGLFYPPDPSSMKISTIGGNINENSG 150
||||||.||||||||||:|.|.|.||||||||||||||||||||||||||
BL01799___ysf 101 DEENLTITVQPGVITLDLIHAAEEKGLFYPPDPSSMKISTIGGNINENSG 150
BSNT_04188___ 151 GLRGLKYGVTRDYVIGLEVVLANGDIIRTGGKLAKDVAGYDLTRLFVGSE 200
||||||||||||||:.||:|||||||||||||||||||||||||||||||
BL01799___ysf 151 GLRGLKYGVTRDYVMALEIVLANGDIIRTGGKLAKDVAGYDLTRLFVGSE 200
BSNT_04188___ 201 GTLGIVTEAIVKLVPKPETKKTLLALYENIDAAAQTVSDIIAAKIIPATL 250
||||::|||.:||:|.||||||:||||::||:||||||:|||.||||.||
BL01799___ysf 201 GTLGVITEATLKLIPAPETKKTVLALYQDIDSAAQTVSNIIAHKIIPTTL 250
BSNT_04188___ 251 EFLDQPTLLVIEDYAKIGLPTNAKAVLLIEQDGPLEIVARDMEKIEAICK 300
|||||||:.||||:||||||.:|||||||||||..:.|.||:..||.|||
BL01799___ysf 251 EFLDQPTIQVIEDFAKIGLPVHAKAVLLIEQDGTEDAVRRDIAVIEEICK 300
BSNT_04188___ 301 KGDAVSVQTAQTEEEAFALTEARRSALSALARLKPTTILEDATVPRSEIA 350
||:||||||||||.||..|.||||:|||||||||||||||||||||||||
BL01799___ysf 301 KGNAVSVQTAQTEAEAENLREARRTALSALARLKPTTILEDATVPRSEIA 350
BSNT_04188___ 351 NMVKAINDIAAKYDISICTFGHAGDGNLHPTCTTDIRNEDEMERVEQAFA 400
.||||||.||.|:.|||||||||||||||||||||:||.:||:||||||.
BL01799___ysf 351 EMVKAINSIAEKHQISICTFGHAGDGNLHPTCTTDVRNSEEMKRVEQAFE 400
BSNT_04188___ 401 EIFEKAIELGGTITGEHGVGAMKAPYLEMKLKKEGIDAMKALKAAFDPRN 450
:||:||:|||||||||||||.|||||||:||...||.||||:|.|.||.|
BL01799___ysf 401 DIFKKAVELGGTITGEHGVGEMKAPYLELKLGNAGIAAMKAVKQALDPNN 450
BSNT_04188___ 451 ILNPGKVFAKDARKRVVAER 470
|:||||:||||:|||||..|
BL01799___ysf 451 IMNPGKIFAKDSRKRVVVTR 470
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.