Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04189 and BL01798
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:16
# Commandline: needle
# -asequence pep-align/BSNT_04189___ysfD.1.5803.seq
# -bsequence pep-align/BL01798___ysfD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04189___ysfD-BL01798___ysfD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04189___ysfD-BL01798___ysfD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04189___ysfD
# 2: BL01798___ysfD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 445
# Identity: 317/445 (71.2%)
# Similarity: 365/445 (82.0%)
# Gaps: 6/445 ( 1.3%)
# Score: 1672.5
#
#
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BSNT_04189___ 1 MTTEKEMKQIQDKFKERMDEGELLNCMRCGFCLPSCPTYIESGFHETHSP 50
|||..|.|.|:.:||:||||.|||||||||||||||||||||||.|:|||
BL01798___ysf 1 MTTADERKVIEQQFKQRMDEEELLNCMRCGFCLPSCPTYIESGFQESHSP 50
BSNT_04189___ 51 RGRIALMKAVADGMIEPDEDVERSLSLCLGCRACEPVCPSGVKYGQLLEE 100
||||||||||.||.|||||||||||.||||||||||||||||.||:||||
BL01798___ysf 51 RGRIALMKAVVDGTIEPDEDVERSLELCLGCRACEPVCPSGVNYGRLLEE 100
BSNT_04189___ 101 ARDIIHQNKKHSLGARVMRKAAFHELFPHQNRMRSAVSLIGLYQRSGLQT 150
|||||.|||||:...:|:|:|.|..||||.||:|:...::|||||||:|.
BL01798___ysf 101 ARDIIQQNKKHAFPVKVLRRAVFKGLFPHPNRIRALTGMLGLYQRSGMQN 150
BSNT_04189___ 151 AVRKTGMLRVLPEHLRTMEAVLPDVPKSKDMKHRPRFLPSIGPMKKRVAF 200
.:||:|:||:||:||..||||||.||..|.:|.||..||:||..|||.||
BL01798___ysf 151 VIRKSGLLRLLPDHLAKMEAVLPKVPNMKQLKKRPHLLPAIGERKKRAAF 200
BSNT_04189___ 201 FSGCLMDTMFLPTNNATLKLLQLAGCDIVIPPEQACCGALHGHSGEKNTG 250
||||||||:||.||.||::||:||||:|:||.:|.|||||||||.||:..
BL01798___ysf 201 FSGCLMDTLFLDTNMATIELLRLAGCEIIIPEQQTCCGALHGHSSEKSEA 250
BSNT_04189___ 251 KELAKQNIAAFEALDVDAVITNAGGCGAFLTEYNHLLKDDPEWSERAAAF 300
..|||:||.|||..:.|.:|||||||||||.||:||||||.||.||||:|
BL01798___ysf 251 ILLAKRNIQAFEDSNADFIITNAGGCGAFLKEYDHLLKDDSEWRERAASF 300
BSNT_04189___ 301 VQKLKDFSSVLVELDFHQMDLALETP-QVVTYQDSCHLRNVMHTSLAPRQ 349
..|||||||||:||:|.|. :||.| |:|||||||||||||.||..||:
BL01798___ysf 301 TGKLKDFSSVLLELNFDQQ--SLELPEQIVTYQDSCHLRNVMKTSAEPRR 348
BSNT_04189___ 350 LLKSIKGAEFKEMEKADSCCGSAGIYNIVEAEMSMRILDSKMAAVKATEA 399
|::||||.|||||:.|:|||||||||||||:||||:|||:||.|..||.|
BL01798___ysf 349 LIRSIKGIEFKEMKNAESCCGSAGIYNIVESEMSMKILDTKMEAAAATRA 398
BSNT_04189___ 400 ILIVTANPGCLLQMKLGIEREGLSGKVRAVHLADLLLEAAGHKPS 444
..||||||||||||||||||.||:.:|||||||||||||...
BL01798___ysf 399 ATIVTANPGCLLQMKLGIERAGLTDRVRAVHLADLLLEAVQK--- 440
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