Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05126 and BL01795

See DNA alignment / Visit BSNT_05126 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:14
# Commandline: needle
#    -asequence pep-align/BSNT_05126___yvbK.1.5803.seq
#    -bsequence pep-align/BL01795___yvbK.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05126___yvbK-BL01795___yvbK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05126___yvbK-BL01795___yvbK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05126___yvbK
# 2: BL01795___yvbK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 153
# Identity:      86/153 (56.2%)
# Similarity:   117/153 (76.5%)
# Gaps:           3/153 ( 2.0%)
# Score: 462.0
# 
#
#=======================================

BSNT_05126___      1 MQHLTIQKATNFDQPLYELLLLADPSKEIVDDYLVRGECYTGYISGELAG     50
                        :.|::.....:|..:|||.||||:::|:|||.||:|||..|...:||
BL01795___yvb      1 ---MNIRRLHPEHEPPLDLLLTADPSEKLVNDYLERGQCYTAEIDRRIAG     47

BSNT_05126___     51 VYVIITTRPQTVEIVNIAVKQTMQKQGIGKLLILDAIEKAKHMGAKVIEI    100
                     |||::.|||:|.|:||||||:.:|.:|||:.|::.|||.||..|.|.|||
BL01795___yvb     48 VYVLLPTRPETAELVNIAVKEDLQGKGIGRQLVMHAIETAKAQGFKTIEI     97

BSNT_05126___    101 GTGNSSIHQLSLYQKCGFRLQAIDHDFFIRHYDEEIFENGIQCRDMVRLY    150
                     |||||||.||:||||||||:..||.:||:|||::.|:|||::|.||:||.
BL01795___yvb     98 GTGNSSIGQLALYQKCGFRITGIDRNFFLRHYEKPIYENGMRCIDMIRLS    147

BSNT_05126___    151 LDL    153
                     |||
BL01795___yvb    148 LDL    150


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