Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05126 and BL01795

See Amino acid alignment / Visit BSNT_05126 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:14
# Commandline: needle
#    -asequence dna-align/BSNT_05126___yvbK.1.5803.seq
#    -bsequence dna-align/BL01795___yvbK.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05126___yvbK-BL01795___yvbK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05126___yvbK-BL01795___yvbK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05126___yvbK
# 2: BL01795___yvbK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 497
# Identity:     304/497 (61.2%)
# Similarity:   304/497 (61.2%)
# Gaps:          79/497 (15.9%)
# Score: 819.0
# 
#
#=======================================

BSNT_05126___      1 ATGCAACACCTCACCATTC--AAAAAGC------AACAAACTTTGATCAA     42
                     |||         |.|||||  |.|..||      ||||     |||.|..
BL01795___yvb      1 ATG---------AACATTCGGAGATTGCATCCAGAACA-----TGAGCCG     36

BSNT_05126___     43 CCGCTGTATGAGCTTCTGCTGCTCGCCGATCCGTCAAAAGAAATTGTTGA     92
                     |||||   |||..|.|||.||...||.||.||.||..||.||.|.|||.|
BL01795___yvb     37 CCGCT---TGATTTGCTGTTGACGGCAGACCCTTCCGAAAAACTGGTTAA     83

BSNT_05126___     93 TGACTACTTGGTCAGAGGAGAATGCTACACAG--GTTATATATCAGGCGA    140
                     .||.|||.|.|...|.|||.|.|||||.||||  |..||..| |.|.||.
BL01795___yvb     84 CGATTACCTCGAACGGGGACAGTGCTATACAGCCGAAATCGA-CCGCCGG    132

BSNT_05126___    141 ATTAGCTGGTGTATACGTGATCATCACAACTAGGCCACAAACGGTAGAAA    190
                     ||| ||.|||||.||.|||.|..|..|.||.|||||..||||||.|||..
BL01795___yvb    133 ATT-GCCGGTGTCTATGTGCTGCTGCCGACGAGGCCTGAAACGGCAGAGC    181

BSNT_05126___    191 TCGTTAACATCGCAGTAAAACAAACAA----TGCA---AAAACAGGGCAT    233
                     ||||.||.|||||.||    ||||.||    ||||   ||||   ||.||
BL01795___yvb    182 TCGTCAATATCGCCGT----CAAAGAAGATCTGCAGGGAAAA---GGAAT    224

BSNT_05126___    234 TGGCA---AGCTTCTTATCCTCGACGCCATTGAAAAAGCGAAA-CACATG    279
                     .||||   |..|..||||.|   |.||.|||||||.||||||| |.|| .
BL01795___yvb    225 CGGCAGACAATTGGTTATGC---ATGCGATTGAAACAGCGAAAGCTCA-A    270

BSNT_05126___    280 GGAGCAAAGGTGATTGAAATAGGTACTGGAAATTCAAGCATCCATCAATT    329
                     |||...|||..|||||||||.||.||.||.||||||||||||..|||..|
BL01795___yvb    271 GGATTTAAGACGATTGAAATCGGAACCGGGAATTCAAGCATCGGTCAGCT    320

BSNT_05126___    330 GTCTCTATATCAAAAATGCGGATTTCGCCTTCAA------GCGATCGACC    373
                     |.|.||.||||||||||||||||||.|     ||      || |||||||
BL01795___yvb    321 GGCGCTCTATCAAAAATGCGGATTTAG-----AATCACCGGC-ATCGACC    364

BSNT_05126___    374 ATGATTTTTTTATCAGACACTACGACGAGGAGATTTTTGAAAACGGCATT    423
                     ...|.|||||..|.|||||.|||||..||..|||.|..|||||||||||.
BL01795___yvb    365 GGAACTTTTTCCTGAGACATTACGAGAAGCCGATATACGAAAACGGCATG    414

BSNT_05126___    424 CAATGCCGTGATATGGTGAGGCTTTATTTGGATCTCT-GA-------    462
                     |..|||...||||||.| ..||||       |||.|| ||       
BL01795___yvb    415 CGCTGCATCGATATGAT-CCGCTT-------ATCGCTCGACCTGTAA    453


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