Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00492 and BL01793
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:07
# Commandline: needle
# -asequence pep-align/BSNT_00492___ycdA.1.5803.seq
# -bsequence pep-align/BL01793___ycdA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00492___ycdA-BL01793___ycdA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00492___ycdA-BL01793___ycdA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00492___ycdA
# 2: BL01793___ycdA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 367
# Identity: 147/367 (40.1%)
# Similarity: 237/367 (64.6%)
# Gaps: 16/367 ( 4.4%)
# Score: 749.0
#
#
#=======================================
BSNT_00492___ 1 MRRKNECFRKKTYAVFLILLLMMFTAACSGSKTSAEKKESETEKSSDIAQ 50
|| .||.:.:.|::::.:.:.||.|||:::.:||. .|.:|.|:
BL01793___ycd 1 MR------SKKFFLMMLLMIVAVVSTACGGSKSASGEKED--TKKADNAE 42
BSNT_00492___ 51 VKIKDVSYTLPSKYDKSTSDDQLVLKVNVAVKNTGKDPLNVDSMDFTLYQ 100
|||....||||.....:..:::|:||:||:||||||:||.||...|:||:
BL01793___ycd 43 VKILSSEYTLPDDSSTNLHENELILKINVSVKNTGKEPLMVDKSQFSLYE 92
BSNT_00492___ 101 GDTKMSDTDP-EDYSEKLQVSTINADKSVEGNLFFVVDKGKQYELNYTPK 149
||:||||... ::.:::|:.||:|:||.|:||::::|:|||:::|.|||.
BL01793___ycd 93 GDSKMSDVSVYDERNKRLRSSTLNSDKEVDGNIYYIVEKGKKFQLEYTPD 142
BSNT_00492___ 150 SYGDKKPKSVTFKIDGKDKKILTTADKLQDSAKALSAYVDVLLFGKDNAD 199
.||:.|...|.|:|||...::|.||.||:|.||||.||.||.:|||||.:
BL01793___ycd 143 MYGENKADPVKFEIDGGSDELLKTAKKLEDPAKALLAYTDVTIFGKDNNN 192
BSNT_00492___ 200 FEKITGANKNEIVNDFNESAKDGYLSASG-LSSTYADSKALDNIVNGIKE 248
|:|:...||.|:|.|:.|.|:...:.:.| ......|.|.|:.:::.|:.
BL01793___ycd 193 FDKLVDENKREVVTDYLEGAQKSIVRSLGYYDEEDVDKKKLNKLISAIQN 242
BSNT_00492___ 249 GLSKNSSIQAKTTSISKDEAIVEATVKPVDASSLSDRIEDKVKDYYSKNS 298
...:.|.::|.|.|||.|||.|||||.|:|.:.:..:::.:::||. |:|
BL01793___ycd 243 AYQEKSQVKAVTKSISGDEATVEATVTPIDNTDVQKKVKKRLEDYV-KDS 291
BSNT_00492___ 299 SASY---EEAVKYALQVYPEEFKKLGPASSEKTVEVKMKKNDIDQWQLDM 345
...: :|.:..|:.:..||.||....|||||||||::|:..|:|::|.
BL01793___ycd 292 GKDFMSRDELINPAIDIMSEEIKKAEATSSEKTVEVKLEKSKNDKWKIDA 341
BSNT_00492___ 346 DDYRAAELVEAFIKE-- 360
|:|:..:...:|:|.
BL01793___ycd 342 DNYKTEQYFSSFLKSNN 358
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