Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04883 and BL01792

See DNA alignment / Visit BSNT_04883 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:04
# Commandline: needle
#    -asequence pep-align/BSNT_04883___yusT.1.5803.seq
#    -bsequence pep-align/BL01792___ytlI.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04883___yusT-BL01792___ytlI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04883___yusT-BL01792___ytlI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04883___yusT
# 2: BL01792___ytlI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 315
# Identity:      74/315 (23.5%)
# Similarity:   145/315 (46.0%)
# Gaps:          41/315 (13.0%)
# Score: 244.0
# 
#
#=======================================

BSNT_04883___      1 MESGDLRVFQMVAREGTITKAALQLGYVQSNVTARIQQLEAELGTTLFLR     50
                     |:...|:.|..:...|:..:||.:|.|.||.||.:|::||.:||..|.  
BL01792___ytl      1 MDFKTLKTFHKIVACGSFNRAAEELNYAQSTVTMQIKKLEEDLGIRLL--     48

BSNT_04883___     51 HNRGMT--LSASGKLLLDYANKIIGLLDEASKALSS-SAEPSGSLMIGST     97
                      .||.|  |:.:|:|..:.:..|:..:|.....::. .....|::.:|:.
BL01792___ytl     49 -ERGKTFRLTEAGRLFFEESRHIVKDIDHLQHHMADLLLGEGGNIRLGAV     97

BSNT_04883___     98 QTTAAVRLPKLLASYYEEHPNVQLSLTTGHTQFLLDKVLRYELDGAFIGC    147
                     :..|:..||::|..:..::|.:::|:...::..|.:::::..||.|....
BL01792___ytl     98 EPIASCELPQILGRFLADYPKIRVSVDIANSSALGERLVQGSLDLAVCST    147

BSNT_04883___    148 ECHHPELESYPAFEEEPVVVSAASVP----------DVEEAITKPILVYS    187
                     .....:|...|.:.||.||:.....|          |:.|   ..:|:.:
BL01792___ytl    148 PAMGTDLYFEPLYAEELVVLLPEGHPAGNNERIHLKDIRE---HRLLITA    194

BSNT_04883___    188 TGCSYRETLEKWLRSVGVTQPVIMEFGTLEAIIGGVTAGLGISLLPRTVV    237
                     ..|:||:.:|...:.:..:|...||.|::.|:...|.||||::|:|:::|
BL01792___ytl    195 NNCTYRKKVEIAFQELPGSQMNTMEIGSMTALKNYVAAGLGVALIPKSIV    244

BSNT_04883___    238 QKHEAEGSIRLYPLPEALSQMKTEFIVRKDSFISSALRTFMDSFTPDKTA    287
                     ..          |.|..:    ..||......::..:.....:| |.|.|
BL01792___ytl    245 SP----------PPPGTI----VRFIDDDPISVTFGILCKTAAF-PLKQA    279

BSNT_04883___    288 ESQKSSLL-------    295
                     :::....|       
BL01792___ytl    280 DAKLYQYLKQELGEP    294


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.