Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03073 and BL01787
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:46
# Commandline: needle
# -asequence pep-align/BSNT_03073___yoaA.1.5803.seq
# -bsequence pep-align/BL01787___ynaD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03073___yoaA-BL01787___ynaD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03073___yoaA-BL01787___ynaD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03073___yoaA
# 2: BL01787___ynaD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 180
# Identity: 72/180 (40.0%)
# Similarity: 108/180 (60.0%)
# Gaps: 5/180 ( 2.8%)
# Score: 327.0
#
#
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BSNT_03073___ 1 MFPILETDRLTLRQITDQDAEAIFACFSNDEVTRYYGLENMESIEQAISM 50
...|.|:|||||::..:||:.:...:|:.|||:|..:.....:.||..|
BL01787___yna 1 -METLYTERLTLRKMELEDADVLCQYWSDPEVTKYMNIAPFTDVSQARDM 49
BSNT_03073___ 51 IQTFAALYQEKRGIRWGIERRDTKELIGTIGFHALAQKHRRAEIGYEIIP 100
||....|..|.:..|:.|..::|.|:|||.||:.:.|::.||||||::..
BL01787___yna 50 IQMINDLSLEGQANRFSIIAKETGEVIGTCGFNMIDQENGRAEIGYDLGR 99
BSNT_03073___ 101 EHWRNGFASEVISKVVSYGFSALGLSRIGAVVFTANEASNRLLLKMGFQK 150
.||..|||||.:.|::.|||::|.|:||.|.|...|..|.:||..:.|||
BL01787___yna 100 NHWGKGFASEAVKKLIDYGFTSLNLNRIEAKVEPENTPSIKLLNSLSFQK 149
BSNT_03073___ 151 EGVLRQYMYQNGIPYDTNVYSIVKPRE--- 177
||:||:|....|...|..::|::| ||
BL01787___yna 150 EGLLREYEKAKGRLIDVYMFSLLK-REYAG 178
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