Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03073 and BL01787

See DNA alignment / Visit BSNT_03073 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:46
# Commandline: needle
#    -asequence pep-align/BSNT_03073___yoaA.1.5803.seq
#    -bsequence pep-align/BL01787___ynaD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03073___yoaA-BL01787___ynaD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03073___yoaA-BL01787___ynaD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03073___yoaA
# 2: BL01787___ynaD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 180
# Identity:      72/180 (40.0%)
# Similarity:   108/180 (60.0%)
# Gaps:           5/180 ( 2.8%)
# Score: 327.0
# 
#
#=======================================

BSNT_03073___      1 MFPILETDRLTLRQITDQDAEAIFACFSNDEVTRYYGLENMESIEQAISM     50
                      ...|.|:|||||::..:||:.:...:|:.|||:|..:.....:.||..|
BL01787___yna      1 -METLYTERLTLRKMELEDADVLCQYWSDPEVTKYMNIAPFTDVSQARDM     49

BSNT_03073___     51 IQTFAALYQEKRGIRWGIERRDTKELIGTIGFHALAQKHRRAEIGYEIIP    100
                     ||....|..|.:..|:.|..::|.|:|||.||:.:.|::.||||||::..
BL01787___yna     50 IQMINDLSLEGQANRFSIIAKETGEVIGTCGFNMIDQENGRAEIGYDLGR     99

BSNT_03073___    101 EHWRNGFASEVISKVVSYGFSALGLSRIGAVVFTANEASNRLLLKMGFQK    150
                     .||..|||||.:.|::.|||::|.|:||.|.|...|..|.:||..:.|||
BL01787___yna    100 NHWGKGFASEAVKKLIDYGFTSLNLNRIEAKVEPENTPSIKLLNSLSFQK    149

BSNT_03073___    151 EGVLRQYMYQNGIPYDTNVYSIVKPRE---    177
                     ||:||:|....|...|..::|::| ||   
BL01787___yna    150 EGLLREYEKAKGRLIDVYMFSLLK-REYAG    178


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