Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02060 and BL01784

See DNA alignment / Visit BSNT_02060 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:32
# Commandline: needle
#    -asequence pep-align/BSNT_02060.1.5803.seq
#    -bsequence pep-align/BL01784___yjgA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02060-BL01784___yjgA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02060-BL01784___yjgA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02060
# 2: BL01784___yjgA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 164
# Identity:      70/164 (42.7%)
# Similarity:    88/164 (53.7%)
# Gaps:          33/164 (20.1%)
# Score: 346.0
# 
#
#=======================================

BSNT_02060         1 MRLFSRFFSGQIKDIFLTIQGDEKETGYQFAMIRNRWIYAVFTVLIIGLG     50
                                                  ..|.|:|......|...:..|
BL01784___yjg      1 -----------------------------MNMKRSRIGRLALTFAAMAAG     21

BSNT_02060        51 LGSRAFSSVLPDTLNTYLGDSLWAAMIFTGCGFLFRKLKTMITGIISLSF    100
                     |.||..:.:|||.:|.||||:|||.|||.|.||||:..||....:|:|.|
BL01784___yjg     22 LASRKTADMLPDIVNVYLGDALWALMIFFGAGFLFKNAKTASAALIALVF     71

BSNT_02060       101 CFVIEFSQLYHAEWIDQIRDTSLGGLVLGYGFLWSDIEAYTIGIAACAAI    150
                     ||:||.||||||.|||.||...||||:|||||||||:.||.:|::|.||.
BL01784___yjg     72 CFMIECSQLYHAPWIDNIRAAPLGGLILGYGFLWSDLLAYVLGVSAGAAG    121

BSNT_02060       151 ELLVLGIKKRRCM-    163
                     |:|   .:||:.. 
BL01784___yjg    122 EML---FRKRKRQP    132


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.