Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02060 and BL01784
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:32
# Commandline: needle
# -asequence dna-align/BSNT_02060.1.5803.seq
# -bsequence dna-align/BL01784___yjgA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02060-BL01784___yjgA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02060-BL01784___yjgA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02060
# 2: BL01784___yjgA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 527
# Identity: 264/527 (50.1%)
# Similarity: 264/527 (50.1%)
# Gaps: 163/527 (30.9%)
# Score: 613.0
#
#
#=======================================
BSNT_02060 1 ATGCGGCTATTCAGCCGCTTTTTTAGTGGACAAATAAAAGATATATTCCT 50
BL01784___yjg 0 -------------------------------------------------- 0
BSNT_02060 51 TACAATACAGGGAGATGAAAAAGAGACGGGGTATCAATTCGCAATGATTC 100
|.|.|.|||||||..||.||| ||..||
BL01784___yjg 1 --------ATGAATATGAAAAGAAGCCGG-------ATAGGC-------- 27
BSNT_02060 101 GAAATCG--TTG----GATATATGCAGTTTTCACCGTACTGATCATTG-G 143
|| ||| ||.||..|||| || ||.| |
BL01784___yjg 28 -----CGGCTTGCGCTGACATTCGCAG-------CG--------ATGGCG 57
BSNT_02060 144 GCTGGGGCTTGGATCCAGA------GCATTCTCCAGTGTTCTTCCTGATA 187
|| ||||||||..||.||| | ||..|.|.||.||.||.|
BL01784___yjg 58 GC-GGGGCTTGCTTCAAGAAAGACGG------CCGATATGCTGCCGGACA 100
BSNT_02060 188 CCCTCAATACTTATCTGGGAGACTCGTTGTGGGCCGCT-ATGATCTT-TA 235
.|.|.|||...|||.|.||.||..||.|||||| |||| |||||.|| |.
BL01784___yjg 101 TCGTGAATGTATATTTAGGGGATGCGCTGTGGG-CGCTGATGATTTTCTT 149
BSNT_02060 236 CGGGATGC-GGATTTCTATTTCGGAA--GCTGAAGA------------CA 270
||| .|| ||.||||| .|||..|| || ||||| |.
BL01784___yjg 150 CGG--CGCAGGCTTTCT-GTTCAAAAACGC-GAAGACGGCTTCCGCGGCG 195
BSNT_02060 271 ATGATAACG--GGCATTATCAGTCTTTCTTTCTGTTTTGTCATTGAATTC 318
.||||..|| || |.||| ||||||.|.|||||||.|
BL01784___yjg 196 CTGATTGCGCTGG-------------TGTTT-TGTTTTATGATTGAATGC 231
BSNT_02060 319 AGCCAGCTCTATCATGCCGAATGGATCGACCAGATTAGGGATACTTCTCT 368
||||||||.|||||.||...||||||.|||.|.||.||.|...||.|.||
BL01784___yjg 232 AGCCAGCTGTATCACGCTCCATGGATTGACAATATCAGAGCCGCTCCGCT 281
BSNT_02060 369 TGGCGGGCTTGTACTGGGGTACGGTTTTTTATGGAGCGA--TATCGAAGC 416
.||.|||||..|.||.||.||.||.|||.|.|||||||| |||.| ||
BL01784___yjg 282 CGGAGGGCTCATTCTCGGTTATGGATTTCTGTGGAGCGATTTATTG--GC 329
BSNT_02060 417 ATATACAATCGGAATTGCCGCCTGTGCCGCCATAGAACTGCTGGTTTTGG 466
.|||....||||..||.||||..|.|||||....|||.||||| ||..|
BL01784___yjg 330 TTATGTGCTCGGCGTTTCCGCAGGCGCCGCGGGCGAAATGCTG--TTCCG 377
BSNT_02060 467 GAATC-AAAAAGCGCCGCTGTATGTGA 492
.||.| |||||| .|.||.|||.
BL01784___yjg 378 CAAACGAAAAAG-ACAGCCGTAA---- 399
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