Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00687 and BL01765
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:19
# Commandline: needle
# -asequence pep-align/BSNT_00687___gabD.1.5803.seq
# -bsequence pep-align/BL01765___gabD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00687___gabD-BL01765___gabD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00687___gabD-BL01765___gabD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00687___gabD
# 2: BL01765___gabD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 464
# Identity: 375/464 (80.8%)
# Similarity: 415/464 (89.4%)
# Gaps: 2/464 ( 0.4%)
# Score: 1993.0
#
#
#=======================================
BSNT_00687___ 1 MPDQLTVYNPATGEEIKTIPQQSAKEVEEAIERSHQAFKTWSKTSANERA 50
|...|.||||||||:||::|||||||||||:.|||:||:.||||||.|||
BL01765___gab 1 MTSMLEVYNPATGEKIKSVPQQSAKEVEEAVVRSHEAFQKWSKTSAAERA 50
BSNT_00687___ 51 SLLKKWYELIVEHKEELADLITKENGKPYQEAVGEVLYGAGYIEWFAEEA 100
.|||||::||||.|:|||.|||.||||||.||.|||||.||||||:||||
BL01765___gab 51 GLLKKWFDLIVEQKDELAKLITLENGKPYAEAQGEVLYSAGYIEWYAEEA 100
BSNT_00687___ 101 KRVYGRTVPAPTTGKRIVVTRQPVGPVAAITPWNFPNAMITRKAAPALAA 150
||:|||||||..|.|||:||||.|||||||||||||.|||||||.|||||
BL01765___gab 101 KRIYGRTVPASVTNKRIIVTRQGVGPVAAITPWNFPAAMITRKAGPALAA 150
BSNT_00687___ 151 GCTFIIKPAPDTPLSAYELARLAYEAGIPKDVLQVVIGDGEEIGNVFTSS 200
||||||||||||||:|.||.||.:||||||||||.|||||:|||::|||.
BL01765___gab 151 GCTFIIKPAPDTPLTALELVRLGHEAGIPKDVLQCVIGDGQEIGSIFTSH 200
BSNT_00687___ 201 PKIRKITFTGSTPVGKILMKNSADTVKHVSMELGGHAPLIVDEDADIDLA 250
|.||||||||||||||.||||||:|||||||||||||||||||||:||||
BL01765___gab 201 PLIRKITFTGSTPVGKHLMKNSAETVKHVSMELGGHAPLIVDEDANIDLA 250
BSNT_00687___ 251 VEQAMASKYRNAGQTCVCANRLIVHESIKDEFAAKLSEQVSKLRVGNGLE 300
|:|.|.|||||||||||||||||||||:|||||.||..:|:||:||||||
BL01765___gab 251 VKQTMLSKYRNAGQTCVCANRLIVHESVKDEFAEKLRAEVAKLKVGNGLE 300
BSNT_00687___ 301 EGVNVGPIINKRGFEKIVSQIDDAVEKGAKVIAGGTYDRNDDKGCYFVNP 350
|||::||||||.||:|||.||:|||.|||||:.|..|:.:|:|.||||:|
BL01765___gab 301 EGVSIGPIINKNGFQKIVDQINDAVNKGAKVLIGAEYESDDEKSCYFVHP 350
BSNT_00687___ 351 TVLTDVDTSMNIMHEETFGPVAPIVTFSDIDEAIQLANDTPYGLAAYFFT 400
|||||||.||.|||||||||||||.:|..:|||::|||||||||||||||
BL01765___gab 351 TVLTDVDPSMTIMHEETFGPVAPITSFKTLDEAVKLANDTPYGLAAYFFT 400
BSNT_00687___ 401 ENYRRGIYISENLEYGIIGWNDGGPSAVQAPFGGMKESGIGREGGSEGIE 450
||||||||:||||:|||:||||||||.||||||||||||||||||.||||
BL01765___gab 401 ENYRRGIYLSENLDYGILGWNDGGPSTVQAPFGGMKESGIGREGGLEGIE 450
BSNT_00687___ 451 PYLETKYLSIGL-- 462
||||||||||||
BL01765___gab 451 PYLETKYLSIGLDE 464
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