Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00687 and BL01765
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:19
# Commandline: needle
# -asequence dna-align/BSNT_00687___gabD.1.5803.seq
# -bsequence dna-align/BL01765___gabD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00687___gabD-BL01765___gabD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00687___gabD-BL01765___gabD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00687___gabD
# 2: BL01765___gabD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1441
# Identity: 1072/1441 (74.4%)
# Similarity: 1072/1441 (74.4%)
# Gaps: 98/1441 ( 6.8%)
# Score: 3975.0
#
#
#=======================================
BSNT_00687___ 1 ---------ATGCCAGATCAATTAACGGTCTACAACCCGGCTACGGGCGA 41
||||.||| .||.||.||.||.||.||.||.||
BL01765___gab 1 ATGACCAGCATGCTAGA---------AGTATATAATCCTGCGACTGGAGA 41
BSNT_00687___ 42 GGAGATCAAAACGATTCCTCAGCAATCAGCCAAAGAAGTAGAAGAAGCCA 91
..|.||||||.||.||||.||||||||.||.||.|||||.||||||||..
BL01765___gab 42 AAAAATCAAATCGGTTCCCCAGCAATCCGCAAAGGAAGTCGAAGAAGCTG 91
BSNT_00687___ 92 TTGAACGTTCACATCAAGCGTTTAAAACGTGGTCTAAAACATCAGC---- 137
|.|.|||.||.|||.|.||.|||.|||..|||||.||||||||.||
BL01765___gab 92 TCGTACGCTCGCATGAGGCATTTCAAAAATGGTCGAAAACATCGGCTGCA 141
BSNT_00687___ 138 GAACGAAAGAGCGTCTCTTT--TGAAAAAATGGTATGAGCTGATTGTTGA 185
||||||..|.|| || ||||||||||||.|||..|.|||||.||
BL01765___gab 142 GAACGAGCGGGC------TTGCTGAAAAAATGGTTTGATTTAATTGTGGA 185
BSNT_00687___ 186 ACATAAAGAAGAACTTGCAGATTTAATTACAAAGGAAAACGGAAAACCTT 235
.||.||.||.||.||.|||.|.||.|||||....||||||||.||.||.|
BL01765___gab 186 GCAGAAGGACGAGCTGGCAAAATTGATTACGCTTGAAAACGGCAAGCCGT 235
BSNT_00687___ 236 ACCAGGAA--GCAGTCGGCGAGGTACTT-TACGGTGCAGGCTATATTGAA 282
||...||| |||| |||||.|| ||| ||..|.|||||||||||.|||
BL01765___gab 236 ACGCTGAAGCGCAG--GGCGAAGT-CTTATATAGCGCAGGCTATATCGAA 282
BSNT_00687___ 283 TGGTTCGCAGAAGAAGCGAAGCGTGTGTACGGAAGAACGGTCCCGGCCCC 332
||||..||.||.|||||||||||..|.||||||||||||||.||.|||.|
BL01765___gab 283 TGGTATGCGGAGGAAGCGAAGCGCATCTACGGAAGAACGGTTCCCGCCTC 332
BSNT_00687___ 333 ---GAC-AACGGGTAAACGAATTGTTGTCACACGCCAGCCGGTCGGCCCC 378
||| ||| ||.||.||..|.||||||||||||...|||||.||.
BL01765___gab 333 TGTGACGAAC----AAGCGCATCATCGTCACACGCCAGGGAGTCGGACCT 378
BSNT_00687___ 379 GTTGCAGCTATCACGCCCTGGAATTTCCCGAATGCGATGATTACACGCAA 428
|||||.||.||.||.||.||||||||.|||...||||||||.||..|.||
BL01765___gab 379 GTTGCGGCGATTACCCCGTGGAATTTTCCGGCGGCGATGATCACGAGAAA 428
BSNT_00687___ 429 AGCGGCGCCTGCTCTTGCCGCTGGCTGTACATTTATCATCAAGCCGGCGC 478
|||||.|||.|||.|.||.||.||||||||.|||||||||||||||||||
BL01765___gab 429 AGCGGGGCCGGCTTTGGCGGCGGGCTGTACCTTTATCATCAAGCCGGCGC 478
BSNT_00687___ 479 CGGACAC-------ACCGCTGTCTGCTTATGAACTAGCACGCCTCGCATA 521
|.||.|| ||.|| ||| |||.||.|..||.||||...|
BL01765___gab 479 CTGATACGCCTTTAACGGC-----GCT--TGAGCTCGTCCGTCTCGGGCA 521
BSNT_00687___ 522 TGAAGCGGGCATTCCGAAGGATGTTCTTCAGGTTGTAATCGGCGATGGAG 571
.|||||||||||||||||.||.||.|||||...|||.||||||||.|||.
BL01765___gab 522 CGAAGCGGGCATTCCGAAAGACGTCCTTCAATGTGTGATCGGCGACGGAC 571
BSNT_00687___ 572 AAGAAATCGGAAATGTGTTCACAAGCAGTCCGAAAATCCGCAAAATCACG 621
||||.|||||...|.|.||.||||||..||||...||||||||.||.|||
BL01765___gab 572 AAGAGATCGGCTCTATTTTTACAAGCCATCCGCTGATCCGCAAGATTACG 621
BSNT_00687___ 622 TTCACAGGCTCAACACCTGTAGGGAAAATCCTT--ATGAAAAACAGCGCG 669
|||||.||.|||||||||||.||.||| |.|| ||||||||||||||.
BL01765___gab 622 TTCACCGGGTCAACACCTGTCGGCAAA--CATTTAATGAAAAACAGCGCC 669
BSNT_00687___ 670 GACACCGTGAAGCACGTCTCAATGGAGCTCGGCGGACACGCCCCGCTGAT 719
||.||.||||||||.||.|||||||||||||||||.||.|||||||||||
BL01765___gab 670 GAGACGGTGAAGCATGTGTCAATGGAGCTCGGCGGCCATGCCCCGCTGAT 719
BSNT_00687___ 720 CGTAGATGAAGATGCAGACATTGACCTTGCCGTTGAACAGGCGATGGCGT 769
|||.|||||||||||..||||||||||.||||||.|.|||.|||||...|
BL01765___gab 720 CGTTGATGAAGATGCCAACATTGACCTCGCCGTTAAGCAGACGATGCTTT 769
BSNT_00687___ 770 CCAAATACCGAAACGCCGGCCAAACCTGCGTATGTGCCAACCGCCTGATC 819
|.||||||.|.||.|||||.|||||.|||||.|||||.|||||.||||||
BL01765___gab 770 CGAAATACAGGAATGCCGGACAAACGTGCGTCTGTGCAAACCGTCTGATC 819
BSNT_00687___ 820 GTTCATGAATCCATCAAGGATGAATTTGCTGCGAAACTGAGCGAGCAAGT 869
|||||||||||..|.||||||||||||||.|..|||||..|||.|.||||
BL01765___gab 820 GTTCATGAATCGGTTAAGGATGAATTTGCAGAAAAACTCCGCGCGGAAGT 869
BSNT_00687___ 870 GTCTAAGCTGAGAGTCGGAAATGGACTTGAGGAAGGCG--TCAATGTCGG 917
..|.|||||||.||||||.||.|||||.||.|||||.| |||| ||||
BL01765___gab 870 TGCCAAGCTGAAAGTCGGGAACGGACTCGAAGAAGGTGTATCAA--TCGG 917
BSNT_00687___ 918 ACCGATCATCAATAAACGAGGCTTTGAAAAAATCGTCAGCCAAATAGATG 967
.|||||||||||||||...|||||..|||||||||||...|||||..|||
BL01765___gab 918 GCCGATCATCAATAAAAACGGCTTCCAAAAAATCGTCGATCAAATCAATG 967
BSNT_00687___ 968 ATGCGGTTGAA-AAAGGCGCGAAAGTGATTGCT----GGGGGCACATATG 1012
|.|||| |||| |||||.||||||| |.|| ||.|.|..|||||
BL01765___gab 968 ACGCGG-TGAATAAAGGGGCGAAAG----TTCTCATCGGCGCCGAATATG 1012
BSNT_00687___ 1013 ACCGAAACGATGACAAAGGGTGCTACTTTGTGAATCCGACAGTGCTCACC 1062
|..|..|.|||||.|||...|||||||||||..|||||||||||||.||.
BL01765___gab 1013 AAAGCGATGATGAGAAATCATGCTACTTTGTCCATCCGACAGTGCTGACG 1062
BSNT_00687___ 1063 GATGTCGATACGTCCATGAACATCATGCATGAGGAAACATTCGGCCCGGT 1112
|||||.|||.|.||.||||..||||||||||||||||||||||||||.||
BL01765___gab 1063 GATGTTGATCCTTCAATGACGATCATGCATGAGGAAACATTCGGCCCCGT 1112
BSNT_00687___ 1113 CGCCCCGAT--CGTCACGTTTT------CTGATATTGATGAAGCGATTCA 1154
.||.||||| |||| |||| ||| ||.||||||.|..|
BL01765___gab 1113 TGCGCCGATTACGTC---TTTTAAAACGCTG-----GACGAAGCGGTCAA 1154
BSNT_00687___ 1155 GCTTGCCAACGATACACCGTATGGCTTGGCTGCTTACTTCTTCACAGAAA 1204
|||.|||||.|||||.||.||.||.||.||.||.||||||||.||.||||
BL01765___gab 1155 GCTCGCCAATGATACGCCTTACGGTTTAGCGGCATACTTCTTTACGGAAA 1204
BSNT_00687___ 1205 ACTACCGCCGCGGCATCTATATTTCCGAGAATCTAGAGTATGGCATTATC 1254
||||||||||||||||||||.|.|||||.||.||.||.||.||||||.||
BL01765___gab 1205 ACTACCGCCGCGGCATCTATTTATCCGAAAACCTTGATTACGGCATTCTC 1254
BSNT_00687___ 1255 GGCTGGAATGACGGCGGACCGTCAGCGGTTCAAGCGCCATTCGGCGGAAT 1304
||||||||||||||||||||||||.|.|||||.|||||.||||||||.||
BL01765___gab 1255 GGCTGGAATGACGGCGGACCGTCAACCGTTCAGGCGCCTTTCGGCGGCAT 1304
BSNT_00687___ 1305 GAAAGAAAGCGGCATTGGCCGTGAAGGCGGTTCAGAAGGTATCGAGCCGT 1354
|||.||||||||.||.||.||.||||||||....|||||.||||||||||
BL01765___gab 1305 GAAGGAAAGCGGTATCGGACGCGAAGGCGGACTGGAAGGCATCGAGCCGT 1354
BSNT_00687___ 1355 ACCTTGAAACAAAATATTTGTCCATCGGTTT------ATAA 1389
|..|.|||||||||||||||||||||||||| ||||
BL01765___gab 1355 ATTTGGAAACAAAATATTTGTCCATCGGTTTGGATGAATAA 1395
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