Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01629 and BL01764
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:06
# Commandline: needle
# -asequence pep-align/BSNT_01629___yhdG.1.5803.seq
# -bsequence pep-align/BL01764___yhdG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01629___yhdG-BL01764___yhdG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01629___yhdG-BL01764___yhdG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01629___yhdG
# 2: BL01764___yhdG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 512
# Identity: 131/512 (25.6%)
# Similarity: 219/512 (42.8%)
# Gaps: 96/512 (18.8%)
# Score: 482.5
#
#
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BSNT_01629___ 1 MKGSVFRKKSIQDLIAATSGEKSLKRELGAFDLTLLGIGAIIGTGIFVLT 50
.|::.:|:.:...|:..|.|||::|.|..||:
BL01764___yhd 1 ------------------MGKQQMKKTMSQTDVLFLAIGAMLGWGWVVLS 32
BSNT_01629___ 51 GTGAVTAG-PGLTISFVVAALACLFAALSYAEFASSVPVSGSVYTFTYAT 99
|....||| .|.||:|::..:..:...|:|||.:|::|.:|....|.|..
BL01764___yhd 33 GDWISTAGFLGSTIAFIIGGILVILIGLTYAELSSAIPETGGGLIFVYRA 82
BSNT_01629___ 100 LGELMAFIIGWDL-----------------ILEYMLAVSAVSVGWSGYFQ 132
.|...||:..|.: :::|:|.|......||
BL01764___yhd 83 FGRKTAFVAAWGVLFGYVSVITFEAVALPTVIDYVLPVEHQGFLWS---- 128
BSNT_01629___ 133 SFLSGLGIHLPVALTAAPGAVKGTFTLFNLPAFVIVMAITYLLYLGIKES 182
|||..:::...|..:.||| .:|.|.|.|:|.:
BL01764___yhd 129 --LSGWDVYVTWVLIGSGGAV----------------VLTALNYFGVKPA 160
BSNT_01629___ 183 KRVNNIMVILKILVVLLFIAVAAVYVKPHNWQPFMPMGFGGVFSAAALVF 232
....::..|..|....|.:..|.|.....:.||....||.|:.|...::.
BL01764___yhd 161 AIFQSVFTIAIIATGFLLLGGALVNGDFEHVQPLFKDGFSGMMSVLVMIP 210
BSNT_01629___ 233 FAFIGFDAVSSAAEETKNPAKDLPKGIIFSLLVCTILY-VTVSAIMTGV- 280
|.|:|||.:...|.|...|.|.:.|.:|.|::...:.| :.|..:..|:
BL01764___yhd 211 FLFVGFDVIPQVAAEINAPKKIIGKILIISIISAVVFYLLIVFGVTMGLS 260
BSNT_01629___ 281 ---IPFAQFAGVDHPVSLVLQSAGQNWVAGIIDIGAVLGMTTVMLVMLYG 327
:.....|..|..|:|: |......::.:|.|.|:.|.....:.|
BL01764___yhd 261 ESELATTSLATADAMVNLL----GNQLFGTVLVLGGVAGIITSWNAFIIG 306
BSNT_01629___ 328 QTRVMFAMSRDGLVPGSLSKVHPKHKTPYVATWFFGTMSALLGSLVPLDE 377
.:|::||||..|:||.....:|||:|||..|..|.|.: |....|:....
BL01764___yhd 307 ASRILFAMSEKGMVPKWFGFIHPKYKTPTNAILFLGAL-AFFAPLLGRPA 355
BSNT_01629___ 378 LAKLVN---IGTLSAFVLISVAVIVLRKKQPDLPRAF-----KCPGVPVI 419
|..:|| .|.:..::::|:|.:.|||.:|||.|.: |..|:..|
BL01764___yhd 356 LVWIVNAGGTGIIVGYLIVSIAFMKLRKTEPDLHRPYKINKWKTTGISAI 405
BSNT_01629___ 420 PGLAILFCLFLILNL--------GWVTIVRFLVWLLIGLVIYFLYSRKHS 461
. |:::|..|.:..: .|:.:.. |.|||.::|...|::..
BL01764___yhd 406 L-LSVIFLAFYLPGMPAALTWPYEWLILAG---WTLIGFLLYNSSSKRKG 451
BSNT_01629___ 462 KLNQ-------- 465
:..|
BL01764___yhd 452 EEIQHDQHARSI 463
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