Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06183 and BL01739

See DNA alignment / Visit BSNT_06183 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:09
# Commandline: needle
#    -asequence pep-align/BSNT_06183___rocF.1.5803.seq
#    -bsequence pep-align/BL01739___rocF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06183___rocF-BL01739___rocF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06183___rocF-BL01739___rocF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06183___rocF
# 2: BL01739___rocF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 297
# Identity:     249/297 (83.8%)
# Similarity:   278/297 (93.6%)
# Gaps:           1/297 ( 0.3%)
# Score: 1320.0
# 
#
#=======================================

BSNT_06183___      1 MDKTISVIGMPMDLGQARRGVDMGPSAIRYAHLIERLSDMGYTVEDLGDI     50
                     |:|.:|:|||||||||||||||||||||||||::|||:::||.::||||:
BL01739___roc      1 MNKQVSLIGMPMDLGQARRGVDMGPSAIRYAHIVERLNELGYDIDDLGDV     50

BSNT_06183___     51 PINREKIKNDEELKNLNSVLAGNEKLAQKVNKVIEEKKFPLVLGGDHSIA    100
                     ||||::.|.||.||||.|||.||.|||..|:.|:|:::||||||||||||
BL01739___roc     51 PINRDQPKGDEGLKNLVSVLEGNRKLADIVDNVVEQRRFPLVLGGDHSIA    100

BSNT_06183___    101 IGTLAGTAKHYDNLGVIWYDAHGDLNTLETSPSGNIHGMPLAVSLGIGHE    150
                     ||||||.||||..|||||||||||||||||||||||||||||||||:|||
BL01739___roc    101 IGTLAGVAKHYQQLGVIWYDAHGDLNTLETSPSGNIHGMPLAVSLGVGHE    150

BSNT_06183___    151 SLVNLEGYAPKIKPENVVIIGARSLDEGERKYIKESGMKVYTMHEIDRLG    200
                     .||||.|||||||||:|||||||||||||||||:|:||||||||||||||
BL01739___roc    151 KLVNLHGYAPKIKPEHVVIIGARSLDEGERKYIRETGMKVYTMHEIDRLG    200

BSNT_06183___    201 MTKVIEETLDYLSA-CDGVHLSLDLDGLDPNDAPGVGTPVVGGISYRESH    249
                     ||||:|||::|||| |||:|||||||||||:|||||||||||||||||||
BL01739___roc    201 MTKVMEETIEYLSANCDGIHLSLDLDGLDPSDAPGVGTPVVGGISYRESH    250

BSNT_06183___    250 LAMEMLYDAGIITSAEFVEVNPILDHKNKTGKTAVELVESLLGKKLL    296
                     |||||||||.|||||||||||||||||||||:.||||:|||||||||
BL01739___roc    251 LAMEMLYDADIITSAEFVEVNPILDHKNKTGEAAVELIESLLGKKLL    297


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