Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06183 and BL01739
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:09
# Commandline: needle
# -asequence dna-align/BSNT_06183___rocF.1.5803.seq
# -bsequence dna-align/BL01739___rocF.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06183___rocF-BL01739___rocF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06183___rocF-BL01739___rocF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06183___rocF
# 2: BL01739___rocF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 903
# Identity: 685/903 (75.9%)
# Similarity: 685/903 (75.9%)
# Gaps: 21/903 ( 2.3%)
# Score: 2531.5
#
#
#=======================================
BSNT_06183___ 1 ATGGATAAAACGA-TTTCGGTTATTGGAATGCCAATGGATTTAGGACAAG 49
|||.|| ||||.| ||||..|.|||||||||||.|||||.||.||.||.|
BL01739___roc 1 ATGAAT-AAACAAGTTTCTTTGATTGGAATGCCGATGGACTTGGGGCAGG 49
BSNT_06183___ 50 CACGACGCGGAGTAGATATGGGCCCGAGTGCCATCCGGTACGCTCATCTG 99
|.||.|||||.||.||||||||.|||||.||.||.||.|||||||||.|.
BL01739___roc 50 CGCGGCGCGGTGTGGATATGGGACCGAGCGCGATTCGCTACGCTCATATC 99
BSNT_06183___ 100 ATCGAGCGGCTGTCA--GACATGGGGTATACGGTTGAAGATCTCGGTGAC 147
.|.|||| ||| |.| ||..||||.|||....|.||.|||||.||.||.
BL01739___roc 100 GTGGAGC-GCT-TAAACGAGCTGGGCTATGATATCGATGATCTGGGCGAT 147
BSNT_06183___ 148 ATTCCGATCAACCGCGAAAAAATCA---AAAATGACGAGGAA---CTGAA 191
.|.||||||||||||| |||| ||||.|| ||.||| |||||
BL01739___roc 148 GTGCCGATCAACCGCG-----ATCAGCCAAAAGGA-GACGAAGGGCTGAA 191
BSNT_06183___ 192 AAACCTGAATTCCGTTTTGGCGGGAAATGAAAAACTCGCGCAAAAGGTCA 241
|||..|...||||||..|||..|||||....||.||.||..|.|..|||.
BL01739___roc 192 AAATTTAGTTTCCGTACTGGAAGGAAACCGCAAGCTGGCCGATATCGTCG 241
BSNT_06183___ 242 ACAAAGTCATTGAAGAGAAAAAATTCCCGCTTGTCCTGGGCGGTGACCAC 291
||||.|||.|.||..||......||||||||.||.||||||||.||||||
BL01739___roc 242 ACAATGTCGTCGAGCAGCGCCGCTTCCCGCTCGTGCTGGGCGGAGACCAC 291
BSNT_06183___ 292 AGTATTGCGATCGGCACGCTTGCAGGCACAGCGAAGCATTACGATAATCT 341
||.|||||.|||||.||..|.||.||...|||.||||||||..|..|.||
BL01739___roc 292 AGCATTGCCATCGGGACATTGGCGGGTGTAGCCAAGCATTATCAACAGCT 341
BSNT_06183___ 342 CGGCGTCATCTGGTATGACGCGCACGGCGATTTGAATACACTTGAAACTT 391
||||||.||.|||||||||||.|||||.||..|.|||||.|||||.||.|
BL01739___roc 342 CGGCGTGATTTGGTATGACGCACACGGAGACCTAAATACGCTTGAGACAT 391
BSNT_06183___ 392 CACCATCGGGCAATATTCACGGCATGCCGCTCGCGGTCAGCCTCGGCATT 441
|.||.||.|||||.||.||||||||||||||.|||||.||.|||||..|.
BL01739___roc 392 CGCCGTCAGGCAACATCCACGGCATGCCGCTGGCGGTAAGTCTCGGTGTC 441
BSNT_06183___ 442 GGCCACGAGTCACTGGTTAACCTTGAAGGCTACGCGCCTAAAATCAAACC 491
||||||||....|||||.|||||..|.|||||.|||||.|||||||||||
BL01739___roc 442 GGCCACGAAAAGCTGGTCAACCTCCACGGCTATGCGCCGAAAATCAAACC 491
BSNT_06183___ 492 GGAAAACGTCGTCATCATTGGCGCCCGGTCACTTGATGAAGGGGAGCGCA 541
|||..|||||||||||||.||.||.||.||.|||||||||||.|||||||
BL01739___roc 492 GGAGCACGTCGTCATCATCGGTGCGCGCTCGCTTGATGAAGGAGAGCGCA 541
BSNT_06183___ 542 AGTACATTAAGGAAAGCGGCATGAAGGTGTACACAATGCACGAAATCGAC 591
|.||.||....||||.|||||||||.||.||.||.|||||.|||||.|||
BL01739___roc 542 AATATATCCGTGAAACCGGCATGAAAGTCTATACCATGCATGAAATTGAC 591
BSNT_06183___ 592 CGTCTTGGCATGACAAAGGTCATTGAAGAAACCCTTGATTATTTATCAGC 641
.|.||.||||||||.|||||.||.||.|||||..|.||.|||||.|||||
BL01739___roc 592 AGGCTCGGCATGACGAAGGTAATGGAGGAAACGATCGAGTATTTGTCAGC 641
BSNT_06183___ 642 A---TGTGATGGCGTCCATCTGAGCCTTGATCTGGACGGACTTGATCCGA 688
| ||.||.|||.|||||||||||||||||||||||||.||||||||||
BL01739___roc 642 AAATTGCGACGGCATCCATCTGAGCCTTGATCTGGACGGTCTTGATCCGA 691
BSNT_06183___ 689 ACGACGCACCGGGTGTCGGAACCCCTGTCGTCGGCGGCATCAGCTATCGG 738
..|||||.|||||.|||||.||||||||||||||.|||||||||||..||
BL01739___roc 692 GTGACGCTCCGGGAGTCGGCACCCCTGTCGTCGGAGGCATCAGCTACAGG 741
BSNT_06183___ 739 GAGAGCCATTTGGCTATGGAAATGCTGTATGACGCAGGCATCATTACCTC 788
||.|||||||||||.|||||||||||.||||||||||..||||||||.||
BL01739___roc 742 GAAAGCCATTTGGCGATGGAAATGCTCTATGACGCAGATATCATTACATC 791
BSNT_06183___ 789 AGCCGAATTCGTTGAGGTTAACCCGATCCTTGATCACAAAAACAAAACGG 838
.|||||.||.|||||.||.||||||||.||.|||||.|||||.|||||.|
BL01739___roc 792 CGCCGAGTTTGTTGAAGTCAACCCGATACTGGATCATAAAAATAAAACCG 841
BSNT_06183___ 839 GCAAAACAGCAGTAGAGCTGGTAGAATCTCTGCTAGGGAAGAAGCTGCTG 888
|..|..|.||.||.||.|||.|.|||||..||.||||||||||.||||||
BL01739___roc 842 GTGAGGCGGCCGTCGAACTGATCGAATCATTGTTAGGGAAGAAACTGCTG 891
BSNT_06183___ 889 TAA 891
|||
BL01739___roc 892 TAA 894
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