Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06185 and BL01737
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:09
# Commandline: needle
# -asequence pep-align/BSNT_06185___rocD.1.5803.seq
# -bsequence pep-align/BL01737___rocD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06185___rocD-BL01737___rocD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06185___rocD-BL01737___rocD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06185___rocD
# 2: BL01737___rocD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 412
# Identity: 349/412 (84.7%)
# Similarity: 375/412 (91.0%)
# Gaps: 12/412 ( 2.9%)
# Score: 1852.0
#
#
#=======================================
BSNT_06185___ 1 MLKQKTRGNSNMTALSKSKEIIDQTSHYGANNYHPLPIVISEALGSWVKD 50
||.||||::|:.||:|:|||||||||||||||.|:||||
BL01737___roc 1 -----------MTVLSKSEKIMKQTAHFGANNYHPLPIVISEAEGAWVKD 39
BSNT_06185___ 51 PEGNEYMDMLSAYSAVNQGHRHPKIIQALKDQADKITLTSRAFHNDQLGP 100
||||.|||||||||||||||||||||||||||||||||||||||||||||
BL01737___roc 40 PEGNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKITLTSRAFHNDQLGP 89
BSNT_06185___ 101 FYEKTAKLTGKEMILPMNTGAEAVESAVKAARRWAYEVKGVADNQAEIIA 150
||||.|.||||:|:||||||||||||||||||||||:||||.||||||||
BL01737___roc 90 FYEKVASLTGKDMVLPMNTGAEAVESAVKAARRWAYDVKGVPDNQAEIIA 139
BSNT_06185___ 151 CVGNFHGRTMLAVSLSSEEEYKRGFGPMLPGIKLIPYGDVEALRQAITPN 200
|.|||||||||||||||||||||||||||||||||||||:|||:||||||
BL01737___roc 140 CEGNFHGRTMLAVSLSSEEEYKRGFGPMLPGIKLIPYGDLEALKQAITPN 189
BSNT_06185___ 201 TAAFLFEPIQGEAGIVIPPEGFLQEAAAICKEENVLFIADEIQTGLGRTG 250
|||||.|||||||||||||||||::||.:|||.||||||||||:||.|||
BL01737___roc 190 TAAFLIEPIQGEAGIVIPPEGFLKQAAEVCKERNVLFIADEIQSGLARTG 239
BSNT_06185___ 251 KTFACDWDGIVPDMYILGKALGGGVFPISCIAADREILGVFNPGSHGSTF 300
|.||.||:.:.||||||||||||||||||||||:|::|||||||||||||
BL01737___roc 240 KMFASDWEDVTPDMYILGKALGGGVFPISCIAANRDVLGVFNPGSHGSTF 289
BSNT_06185___ 301 GGNPLACAVSIASLEVLEDEKLADRSLELGEYFKSELESIDNPVIKEVRG 350
||||||||||||:|||||||:||:||||||||||.:|..||||.||||||
BL01737___roc 290 GGNPLACAVSIAALEVLEDERLAERSLELGEYFKEKLSQIDNPKIKEVRG 339
BSNT_06185___ 351 RGLFIGVELTEAARPYCERLKEEGLLCKETHDTVIRFAPPLIISKEDLDW 400
|||||||||||||||||||||||||||||||:|||||||||:||.|||||
BL01737___roc 340 RGLFIGVELTEAARPYCERLKEEGLLCKETHETVIRFAPPLVISHEDLDW 389
BSNT_06185___ 401 AIEKIKHVLQNA 412
|||||..||..
BL01737___roc 390 AIEKITRVLSK- 400
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