Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00627 and BL01729

See DNA alignment / Visit BSNT_00627 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:15
# Commandline: needle
#    -asequence pep-align/BSNT_00627___srfAD.1.5803.seq
#    -bsequence pep-align/BL01729___lchAD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00627___srfAD-BL01729___lchAD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00627___srfAD-BL01729___lchAD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00627___srfAD
# 2: BL01729___lchAD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 246
# Identity:     148/246 (60.2%)
# Similarity:   186/246 (75.6%)
# Gaps:           4/246 ( 1.6%)
# Score: 778.5
# 
#
#=======================================

BSNT_00627___      1 MSQLFKSFDA-SEKTQLICFPFAGGYSASFRPLHAFLQGECEMLAAEPPG     49
                     |:::.|.|.| :...|||||||||||||||||||..|:.:.:|||.||||
BL01729___lch      1 MNEIIKQFGAPASGMQLICFPFAGGYSASFRPLHEHLKTDFDMLAIEPPG     50

BSNT_00627___     50 HGTNQTSAIEDLEELTDLYKQELNLRPDRPFVLFGHSMGGMITFRLAQKL     99
                     ||||:.:.:::||:|.|||...|..|....|||||||||||:.:||||||
BL01729___lch     51 HGTNRMALVDNLEKLADLYIAALKPRLSSQFVLFGHSMGGMVVYRLAQKL    100

BSNT_00627___    100 EREGIFPQAVIISAIQPPHIQRKKVSHLPDDQFLDHIIQLGGMPAELVEN    149
                     |:|||||.|.:|||||||||||:||||..||.||||:|||||:|.||.|:
BL01729___lch    101 EQEGIFPAAAVISAIQPPHIQRQKVSHQKDDAFLDHLIQLGGIPKELAEH    150

BSNT_00627___    150 KEVMSFFLPSFRSDYRALEQFELYDLAQIQSPVHVFNGLDDKKCIRDAEG    199
                     :|:|:|||||||:||||||.|...|...::||||:.||..|:||:|||.|
BL01729___lch    151 REMMNFFLPSFRADYRALETFCHTDHTPLRSPVHILNGDRDEKCMRDALG    200

BSNT_00627___    200 WKKWAKDITFHQFDGGHMFLLSQTEEVAERI--FAILNQHPIIQP-    242
                     |||||..|.||.|.||||:|||:||:||.::  .|..::...:.. 
BL01729___lch    201 WKKWANTIDFHYFKGGHMYLLSETEQVAAKLKTIAAASRSTAVPTM    246


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